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NECEvent2014_6_7_scaffold_101_29

Organism: NECEvent2014_6_7_Clostridium_perfringens_28_32

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: comp(36604..37197)

Top 3 Functional Annotations

Value Algorithm Source
Putative 30S ribosomal protein S4 B n=6 Tax=Clostridium perfringens RepID=RS4B_CLOPE similarity UNIREF
DB: UNIREF100
  • Identity: 98.5
  • Coverage: 197.0
  • Bit_score: 390
  • Evalue 8.60e-106
  • rbh
rpsD; 30S ribosomal protein S4 similarity KEGG
DB: KEGG
  • Identity: 98.5
  • Coverage: 197.0
  • Bit_score: 390
  • Evalue 2.40e-106
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE st similarity UNIPROT
DB: UniProtKB
  • Identity: 98.5
  • Coverage: 197.0
  • Bit_score: 390
  • Evalue 1.20e-105

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 594
ATGGCTAAGATGATGGGACCTCGTTTCAAAATGTGCAGAAGACTTGGATTAAATGTAGTTGGACATCCAAAGGCAATGAAACGAGCTGGTAGAGGAACAAGCAGAGCAGATAAGAAATTATCTGATTACGGTATTCAATTATTAGAAAAGCAAAGATTAAGAGCTTACTACGGTGTTATGGAAAGACAATTTACTAGATATGTAGATGAAGCTTTCAATAGTAAAGAACAACCTGGTGAGGCTTTACTTATGATTTTAGAATCAAGACTTGATAATATGGTATATAGAATGGGGTTTGCTAACTCAATAAGACAAGCAAGACAAATGGTTAACCATGGACATTTCTTAGTAAATGGAAAGAAAGTTAATATACCATCTTTCAGATTAAATATAGGTGATGAAGTTGTTTTAAGAGAAAAATCAAGAAAAACAGAAATGTTTGTAAACAACTTTAAAGATAGCATAGGAAGTGAAGTTCCTTACATAAGTAAAGAAGAAGATAACTTTAAAGGGATTTTCACTAGAAAGCCTAAGAGAGAAGAAATTCCAATAACAATACAAGAACAATTAATAGTTGAATTCTATTCTAAATAA
PROTEIN sequence
Length: 198
MAKMMGPRFKMCRRLGLNVVGHPKAMKRAGRGTSRADKKLSDYGIQLLEKQRLRAYYGVMERQFTRYVDEAFNSKEQPGEALLMILESRLDNMVYRMGFANSIRQARQMVNHGHFLVNGKKVNIPSFRLNIGDEVVLREKSRKTEMFVNNFKDSIGSEVPYISKEEDNFKGIFTRKPKREEIPITIQEQLIVEFYSK*