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NECEvent2014_6_7_scaffold_101

Alias: 176_007_scaffold_101

Search features with annotation key words

Displaying items 1-30 of 75 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_7_scaffold_101_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(181..1647)
DNA (1467bp) protein (489aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
Sensor histidine kinase n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V436_CLOPF rbh
two-component sensor histidine kinase
NECEvent2014_6_7_scaffold_101_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1610..2302)
DNA (693bp) protein (231aa)
Two-component response regulator n=6 Tax=Clostridium perfringens RepID=Q8XHZ2_CLOPE rbh
two-component response regulator
Two-component response regulator {ECO:0000313|EMBL:ABG85327.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (s
NECEvent2014_6_7_scaffold_101_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2472..2789)
DNA (318bp) protein (106aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=Q0SQL3_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG86209.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM1
NECEvent2014_6_7_scaffold_101_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2855..3154)
DNA (300bp) protein (100aa)
TrpR-like protein YerC/YecD n=10 Tax=Clostridium perfringens RepID=H7CZ40_CLOPF
TrpR-like protein YerC/YecD
TrpR homolog YerC/YecD {ECO:0000313|EMBL:EDT27475.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F49
NECEvent2014_6_7_scaffold_101_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3294..4133)
DNA (840bp) protein (280aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1RPM0_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT71442.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1
hypothetical protein
NECEvent2014_6_7_scaffold_101_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4250..6268)
DNA (2019bp) protein (673aa)
Putative glycogen debranching enzyme, archaeal type n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RPL9_CLOPF rbh
Putative glycogen debranching enzyme, type {ECO:0000313|EMBL:EIA16108.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perf
glycogen debranching enzyme, type
NECEvent2014_6_7_scaffold_101_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6619..8982)
DNA (2364bp) protein (788aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
glgP; glycogen/starch/alpha-glucan phosphorylase (EC:2.4.1.1)
Phosphorylase n=2 Tax=Clostridium perfringens RepID=H7CZ43_CLOPF rbh
NECEvent2014_6_7_scaffold_101_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8975..10468)
DNA (1494bp) protein (498aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:
malQ; 4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase n=2 Tax=Clostridium perfringens RepID=H7CZ44_CLOPF rbh
NECEvent2014_6_7_scaffold_101_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10490..12637)
DNA (2148bp) protein (716aa)
Glucosyl hydrolase family protein n=2 Tax=Clostridium perfringens RepID=H7CZ45_CLOPF rbh
Glucosyl hydrolase family protein {ECO:0000313|EMBL:EIA16111.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F
glycosyl hydrolase
NECEvent2014_6_7_scaffold_101_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12661..13674)
DNA (1014bp) protein (338aa)
LacI family transcription regulator n=2 Tax=Clostridium perfringens RepID=H7CZ46_CLOPF rbh
LacI family transcription regulator {ECO:0000313|EMBL:EIA16112.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
LacI family transcriptional regulator
NECEvent2014_6_7_scaffold_101_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13969..14862)
DNA (894bp) protein (298aa)
Putative maltose/maltodextrin ABC transporter, permease protein n=6 Tax=Clostridium perfringens RepID=H7CZ47_CLOPF rbh
maltose/maltodextrin ABC transporter permease
Putative maltose/maltodextrin ABC transporter, permease protein {ECO:0000313|EMBL:EIA16113.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sou
NECEvent2014_6_7_scaffold_101_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14864..15817)
DNA (954bp) protein (318aa)
Putative maltose/maltodextrin ABC transporter, permease protein n=4 Tax=Clostridium perfringens RepID=H7CZ48_CLOPF rbh
maltose/maltodextrin ABC transporter permease
Putative maltose/maltodextrin ABC transporter, permease protein {ECO:0000313|EMBL:EIA16114.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sou
NECEvent2014_6_7_scaffold_101_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15904..17130)
DNA (1227bp) protein (409aa)
Putative maltose/maltodextrin ABC transporter, maltose/maltodextrin-binding protein n=6 Tax=Clostridium perfringens RepID=H7CZ49_CLOPF rbh
maltose/maltodextrin ABC transporter maltose/maltodextrin-binding protein
Putative maltose/maltodextrin ABC transporter, maltose/maltodextrin-binding protein {ECO:0000313|EMBL:EIA16115.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae
NECEvent2014_6_7_scaffold_101_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17588..18529)
DNA (942bp) protein (314aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1BQK2_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT16050.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
hypothetical protein
NECEvent2014_6_7_scaffold_101_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18564..19673)
DNA (1110bp) protein (370aa)
Probable maltose ABC transportor n=7 Tax=Clostridium perfringens RepID=Q8XHX9_CLOPE rbh
maltose ABC transporter
Putative maltose/maltodextrin ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDT16031.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
NECEvent2014_6_7_scaffold_101_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19892..21610)
DNA (1719bp) protein (573aa)
Iron hydrogenase n=6 Tax=Bacteria RepID=H7CZ52_CLOPF rbh
Iron hydrogenase {ECO:0000313|EMBL:EDS78838.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hydA; iron hydrogenase
NECEvent2014_6_7_scaffold_101_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21836..22906)
DNA (1071bp) protein (357aa)
buk; butyrate kinase (EC:2.7.2.7)
Probable butyrate kinase {ECO:0000256|HAMAP-Rule:MF_00542}; Short=BK {ECO:0000256|HAMAP-Rule:MF_00542};; EC=2.7.2.7 {ECO:0000256|HAMAP-Rule:MF_00542};; Branched-chain carboxylic acid kinase {ECO:00002
Probable butyrate kinase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RPK8_CLOPF rbh
NECEvent2014_6_7_scaffold_101_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22931..23839)
DNA (909bp) protein (303aa)
ptb; phosphate butyryltransferase (EC:2.3.1.19)
Phosphate butyryltransferase {ECO:0000313|EMBL:EIA16120.1}; EC=2.3.1.19 {ECO:0000313|EMBL:EIA16120.1};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridi
Phosphate butyryltransferase n=9 Tax=Clostridium perfringens RepID=H7CZ54_CLOPF rbh
NECEvent2014_6_7_scaffold_101_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24022..25623)
DNA (1602bp) protein (534aa)
Uncharacterized protein n=5 Tax=Clostridium perfringens RepID=B1R7N5_CLOPF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT27447.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
NECEvent2014_6_7_scaffold_101_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25699..27027)
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R7N4_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT23733.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC
hypothetical protein
NECEvent2014_6_7_scaffold_101_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26994..27851)
DNA (858bp) protein (286aa)
Uncharacterized protein n=11 Tax=Clostridium perfringens RepID=H7CZ57_CLOPF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT16038.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
NECEvent2014_6_7_scaffold_101_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28012..28974
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SQJ5_CLOPS rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG87093.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM1
NECEvent2014_6_7_scaffold_101_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29045..29647
DNA (603bp) protein (201aa)
Spore cortex-lytic enzyme n=2 Tax=Clostridium perfringens RepID=H7CZ59_CLOPF rbh
spore cortex-lytic protein
Probable spore cortex-lytic enzyme {ECO:0000313|EMBL:BAB82059.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
NECEvent2014_6_7_scaffold_101_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29679..30539)
DNA (861bp) protein (287aa)
Pyridine nucleotide-disulphide oxidoreductase n=7 Tax=Clostridium perfringens RepID=Q0SQJ3_CLOPS rbh
trxR; thioredoxin reductase
Pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:EDT27455.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium p
NECEvent2014_6_7_scaffold_101_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30566..30880)
DNA (315bp) protein (105aa)
Thioredoxin n=8 Tax=Clostridium perfringens RepID=Q0TMU6_CLOP1
thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).
NECEvent2014_6_7_scaffold_101_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30997..32166)
DNA (1170bp) protein (390aa)
Isoaspartyl dipeptidase {ECO:0000256|PIRNR:PIRNR001238}; EC=3.4.19.- {ECO:0000256|PIRNR:PIRNR001238};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridiu
Isoaspartyl dipeptidase n=3 Tax=Clostridium perfringens RepID=Q8XHX0_CLOPE rbh
isoaspartyl dipeptidase
NECEvent2014_6_7_scaffold_101_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32331..33950)
DNA (1620bp) protein (540aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=
Phosphoenolpyruvate-protein phosphotransferase n=7 Tax=Clostridium perfringens RepID=H7CZ63_CLOPF rbh
phosphoenolpyruvate-protein phosphotransferase
NECEvent2014_6_7_scaffold_101_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34425..36431
DNA (2007bp) protein (669aa)
Phosphocarrier HPr/sensory box protein/sigma-54 dependent transcriptional regulator n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SQI9_CLOPS rbh
Phosphocarrier HPr/sensory box protein/sigma-54 dependent transcriptional regulator {ECO:0000313|EMBL:ABG86932.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae
phosphocarrier HPr/sensory box protein/sigma-54 dependent transcriptional regulator
NECEvent2014_6_7_scaffold_101_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(36604..37197)
DNA (594bp) protein (198aa)
Putative 30S ribosomal protein S4 B n=6 Tax=Clostridium perfringens RepID=RS4B_CLOPE rbh
rpsD; 30S ribosomal protein S4
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE st
NECEvent2014_6_7_scaffold_101_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37598..38632)
DNA (1035bp) protein (345aa)
nrdF; ribonucleotide-diphosphate reductase subunit beta (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase subunit beta {ECO:0000256|PIRNR:PIRNR000355}; EC=1.17.4.1 {ECO:0000256|PIRNR:PIRNR000355};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales;
Ribonucleoside-diphosphate reductase subunit beta n=9 Tax=Clostridium perfringens RepID=H7CZ66_CLOPF rbh
Displaying items 1-30 of 75 in total

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