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NECEvent2014_6_7_scaffold_340_12

Organism: NECEvent2014_6_7_Clostridium_perfringens_28_32

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: comp(11205..11720)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; similarity UNIPROT
DB: UniProtKB
  • Identity: 98.2
  • Coverage: 171.0
  • Bit_score: 332
  • Evalue 3.40e-88
Shikimate kinase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RQN9_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 171.0
  • Bit_score: 336
  • Evalue 1.70e-89
  • rbh
aroK; shikimate kinase similarity KEGG
DB: KEGG
  • Identity: 98.2
  • Coverage: 171.0
  • Bit_score: 332
  • Evalue 6.80e-89
  • rbh

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 516
ATGAAAAAAAGAGGAGTACTTTTAATTGGAATGCCTGGAGCAGGAAAAACAACCATAGGAAGAGATCTTTCAAAGGTATTAAAGATGAATTTTTTAGACATGGATGAATTCATAGAAAGAAGTACAGGAAAAGAAATAAAAGAACTTTTTGCTCAGGGAGAAGAAGTTTTTAGAGATTTAGAAAGTAAAAGTTGTGAACTTTTATCAACCTTAAAAAATGTGGTTATATCTTCTGGTGGCGGAATAGTTACAAGAGAAGAAAATATGGGGAATTTTAAGGAGTTTATAACTGTTTTTATAAACAGACCTTTAGATTTAATCATGGAAGATATAGACACAGAAGGAAGACCTCTTTTATGGGATGGAAAAGAAAGACTTACTAATTTATATAGAGATAGAATTGATTTATATAAAAAGCATAGTGATATAGAAATTATAAATGATGGTACTACTAAAGAGGCTATTAGAGAAATAGTTAAAGCTATTTCTGAGTTTGGTTTACAAGAGAAAGAATAG
PROTEIN sequence
Length: 172
MKKRGVLLIGMPGAGKTTIGRDLSKVLKMNFLDMDEFIERSTGKEIKELFAQGEEVFRDLESKSCELLSTLKNVVISSGGGIVTREENMGNFKEFITVFINRPLDLIMEDIDTEGRPLLWDGKERLTNLYRDRIDLYKKHSDIEIINDGTTKEAIREIVKAISEFGLQEKE*