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NECEvent2014_6_7_scaffold_340

Alias: 176_007_scaffold_340

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_7_scaffold_340_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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324..1466
DNA (1143bp) protein (381aa)
Putative monogalactosyldiacylglycerol synthase n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R6H3_CLOPF rbh
monogalactosyldiacylglycerol synthase
Putative monogalactosyldiacylglycerol synthase {ECO:0000313|EMBL:EDT24102.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
NECEvent2014_6_7_scaffold_340_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1516..1989
DNA (474bp) protein (158aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TT79_CLOP1 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT16406.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
NECEvent2014_6_7_scaffold_340_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2046..3113)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BL27_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDS79499.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1
hypothetical protein
NECEvent2014_6_7_scaffold_340_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3186..4364)
DNA (1179bp) protein (393aa)
Aspartate aminotransferase n=3 Tax=Clostridium perfringens RepID=H7CTG2_CLOPF rbh
Aspartate aminotransferase {ECO:0000313|EMBL:EIA17964.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
aspartate aminotransferase
NECEvent2014_6_7_scaffold_340_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4361..4843)
DNA (483bp) protein (161aa)
AsnC family transcriptional regulator n=10 Tax=Clostridium perfringens RepID=H7CTG1_CLOPF rbh
AsnC family transcriptional regulator
AsnC family transcriptional regulator {ECO:0000313|EMBL:EIA17963.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringe
NECEvent2014_6_7_scaffold_340_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5627..6616)
DNA (990bp) protein (330aa)
choloylglycine hydrolase (EC:3.5.1.24)
Choloylglycine hydrolase n=8 Tax=Clostridium perfringens RepID=CBH_CLOPE rbh
Choloylglycine hydrolase {ECO:0000313|EMBL:EIA17962.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_6_7_scaffold_340_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6731..7942)
DNA (1212bp) protein (404aa)
Putative ABC transporter, permease protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RQN4_CLOPF rbh
Putative ABC transporter, permease protein {ECO:0000313|EMBL:EDT73061.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perf
hypothetical protein
NECEvent2014_6_7_scaffold_340_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7944..8834)
DNA (891bp) protein (297aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridium perfringens RepID=B1BP71_CLOPF rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDT16576.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringen
ABC transporter ATP-binding protein
NECEvent2014_6_7_scaffold_340_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8960..9802)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RQN6_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT16594.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
hypothetical protein
NECEvent2014_6_7_scaffold_340_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9972..10487)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RQN7_CLOPF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB80409.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_6_7_scaffold_340_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10570..11067)
DNA (498bp) protein (166aa)
aroQ; 3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169,
3-dehydroquinate dehydratase n=6 Tax=Clostridium perfringens RepID=AROQ_CLOPE
NECEvent2014_6_7_scaffold_340_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11205..11720)
DNA (516bp) protein (172aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia;
Shikimate kinase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RQN9_CLOPF rbh
aroK; shikimate kinase rbh
NECEvent2014_6_7_scaffold_340_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11974..12789)
DNA (816bp) protein (272aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000
Shikimate dehydrogenase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RQP0_CLOPF rbh
aroE; shikimate 5-dehydrogenase
NECEvent2014_6_7_scaffold_340_14
unknown

Not on your lists

13200..13466
DNA (267bp) protein (89aa)

This feature has no annotations

NECEvent2014_6_7_scaffold_340_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13612..13905)
DNA (294bp) protein (98aa)
chorismate mutase (EC:5.4.99.5)
Chorismate mutase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RQP1_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:BAB80404.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_6_7_scaffold_340_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14074..15147)
DNA (1074bp) protein (358aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU0
aroC; chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RQP2_CLOPF rbh
NECEvent2014_6_7_scaffold_340_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15211..16485)
DNA (1275bp) protein (425aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyru
aroA; 3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BL40_CLOPF rbh
NECEvent2014_6_7_scaffold_340_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16679..17731)
DNA (1053bp) protein (351aa)
aroB; 3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase {ECO:0000255|HAMAP-Rule:MF_00110}; EC=4.2.3.4 {ECO:0000255|HAMAP-Rule:MF_00110};; TaxID=195103 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clost
3-dehydroquinate synthase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RQP4_CLOPF rbh
NECEvent2014_6_7_scaffold_340_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17852..18865)
DNA (1014bp) protein (338aa)
aroF; 3-deoxy-7-phosphoheptulonate synthase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:EDT24202.1}; EC=2.5.1.54 {ECO:0000313|EMBL:EDT24202.1};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridia
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RQP5_CLOPF rbh
NECEvent2014_6_7_scaffold_340_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19337..24397)
DNA (5061bp) protein (1687aa)
Fibronectin type III domain protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RQP7_CLOPF rbh
Fibronectin type III domain protein {ECO:0000313|EMBL:EDT73138.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
hypothetical protein
NECEvent2014_6_7_scaffold_340_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24797..25444)
DNA (648bp) protein (216aa)
translaldolase (EC:2.2.1.2)
Probable transaldolase {ECO:0000255|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000255|HAMAP-Rule:MF_00494};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostrid
Probable transaldolase n=8 Tax=Clostridium perfringens RepID=TAL_CLOPE rbh
NECEvent2014_6_7_scaffold_340_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26069..27280
DNA (1212bp) protein (404aa)
argG; argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase {ECO:0000255|HAMAP-Rule:MF_00005}; EC=6.3.4.5 {ECO:0000255|HAMAP-Rule:MF_00005};; Citrulline--aspartate ligase {ECO:0000255|HAMAP-Rule:MF_00005}; TaxID=195102 species="Bacte
Argininosuccinate synthase n=4 Tax=Clostridium perfringens RepID=ASSY_CLOPE rbh
NECEvent2014_6_7_scaffold_340_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27373..28773
DNA (1401bp) protein (467aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:S
Argininosuccinate lyase n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CNJ4_CLOPF rbh
argH; argininosuccinate lyase
NECEvent2014_6_7_scaffold_340_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28911..29453)
DNA (543bp) protein (181aa)
Rubredoxin/rubrerythrin n=9 Tax=Clostridium perfringens RepID=H7CTD9_CLOPF rbh
hypothetical protein
Rubredoxin/rubrerythrin {ECO:0000313|EMBL:EIA17941.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_6_7_scaffold_340_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29986..30348)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RGV3_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS79572.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1
hypothetical protein
Displaying 25 items

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