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NECEvent2014_6_7_scaffold_5080_1

Organism: NECEvent2014_6_7_Peptoclostridium_difficile_29_7_partial

partial RP 33 / 55 BSCG 30 / 51 ASCG 7 / 38 MC: 3
Location: comp(1..294)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S12 n=183 Tax=Clostridium difficile RepID=C9XII5_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 98.0
  • Bit_score: 194
  • Evalue 5.90e-47
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=525258 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridi similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 98.0
  • Bit_score: 194
  • Evalue 8.30e-47
rpsL; 30S ribosomal protein S12 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 97.0
  • Bit_score: 192
  • Evalue 6.30e-47

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 294
ATGATGCCAACAATTAACCAATTAGTTCGTAAAAGTAGAAAAGCGCTAGAGAAGAAATCTACTGCTCCAGCATTACAAAAAGGTTACAACTCTTTAAATAAGAAAGTAACTGACGCTAGTGCCCCACAAAAAAGAGGGGTTTGTACTTCAGTAAAAACAGTTACTCCTAAGAAGCCTAACTCAGCTTTAAGAAAAGTTGCCAGAGTTAGATTAACTAATGGTATAGAAGTTTCTGCTTATATACCAGGAGAAGGACACAACTTACAAGAGCATAGTGTTGTTCTTATAAGAGGT
PROTEIN sequence
Length: 98
MMPTINQLVRKSRKALEKKSTAPALQKGYNSLNKKVTDASAPQKRGVCTSVKTVTPKKPNSALRKVARVRLTNGIEVSAYIPGEGHNLQEHSVVLIRG