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NECEvent2014_6_7_scaffold_5080_2

Organism: NECEvent2014_6_7_Peptoclostridium_difficile_29_7_partial

partial RP 33 / 55 BSCG 30 / 51 ASCG 7 / 38 MC: 3
Location: comp(580..1350)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 256.0
  • Bit_score: 502
  • Evalue 3.70e-139
DNA-directed RNA polymerase subunit beta' n=1 Tax=Clostridium difficile CD178 RepID=T3FWA1_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 256.0
  • Bit_score: 502
  • Evalue 2.60e-139
rpoC; DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 256.0
  • Bit_score: 502
  • Evalue 7.40e-140

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 771
CTTACAATGCGTACATTCCATACTGGAGGAGTTGCAGGAGCTGATATAACTCAAGGTCTACCAAGGGTTGAAGAATTATTTGAAGCTAGAAAACCAAAAGGATTAGCTGTAATAACTGAAGTATCTGGTAGAGTTGAAATTGATGAAACAGGAAAGAGAAAAGAAGTAAATGTAATACCAGAAGAAGGCGAGACTCAAACATATGTAATTCCATATGGTTCTAGATTAAAAGTTAAGCAAGGTCAAATGCTAGAGGCTGGAGACCCTCTAACACAAGGATTTATAAATCCTCATGATATAGTAAGAGTAAATGGTGTTAAGGGAGTTCAAGAATATATAGTTAAAGAAGTTCAAAGAGTGTATAGACTTCAAGGGGTTGATGTTAATGATAAGCATATAGAAGTTATAGTAAGACAAATGCTATCTAAAGTAAAAGTTGAAGACCCAGGAGATACAGATTTATTGCCAGGTGGATATGAAGATGTATTAACATTCAATGAATGTAATAAAGATGCTATAGATAAAGGTCTAAGACCAGCAGTTGCTAAAAGAGTTTTACTTGGTATAACTAAAGCATCTCTTGCAACTGATTCATTCTTATCAGCAGCTTCTTTCCAAGAAACAACAAGAGTATTAACAGAGGCAGCAATAAAAGGTAAAGAAGACCACTTAATAGGACTTAAAGAAAATGTTATATTAGGTAAGTTAATACCAGCAGGAACAGGAATGAAGAAATATAGAAATATAGCTGTTGAAAAAATTGAAGATTAA
PROTEIN sequence
Length: 257
LTMRTFHTGGVAGADITQGLPRVEELFEARKPKGLAVITEVSGRVEIDETGKRKEVNVIPEEGETQTYVIPYGSRLKVKQGQMLEAGDPLTQGFINPHDIVRVNGVKGVQEYIVKEVQRVYRLQGVDVNDKHIEVIVRQMLSKVKVEDPGDTDLLPGGYEDVLTFNECNKDAIDKGLRPAVAKRVLLGITKASLATDSFLSAASFQETTRVLTEAAIKGKEDHLIGLKENVILGKLIPAGTGMKKYRNIAVEKIED*