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NECEvent2014_6_7_scaffold_183

Alias: 176_007_scaffold_183

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_7_scaffold_183_1
unknown

Not on your lists

comp(83..313)
DNA (231bp) protein (77aa)

This feature has no annotations

NECEvent2014_6_7_scaffold_183_2
Shigella dysenteriae, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(294..1145)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Shigella dysenteriae serotype 1 (strain Sd197) RepID=Q32H82_SHIDS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHA64335.1}; TaxID=754093 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella dysenter
NECEvent2014_6_7_scaffold_183_3
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1215..2402)
DNA (1188bp) protein (396aa)
Uncharacterized protein n=1 Tax=Enterobacter cloacae BWH 31 RepID=V3HIK2_ENTCL rbh
Uncharacterized protein {ECO:0000313|EMBL:ESM32325.1}; TaxID=1329845 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae c
integrase
NECEvent2014_6_7_scaffold_183_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2446..3933
DNA (1488bp) protein (496aa)
Thermostable carboxypeptidase 1 {ECO:0000313|EMBL:CDL41463.1}; EC=3.4.17.19 {ECO:0000313|EMBL:CDL41463.1};; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Ent
Carboxypeptidase Taq n=3 Tax=Citrobacter RepID=J0LTY1_9ENTR rbh
peptidase M32
NECEvent2014_6_7_scaffold_183_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4071..4466
DNA (396bp) protein (132aa)
Acid shock protein n=7 Tax=Citrobacter RepID=J1FXT4_9ENTR
Acid shock protein {ECO:0000256|HAMAP-Rule:MF_00546}; Flags: Precursor;; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citro
acid-shock protein
NECEvent2014_6_7_scaffold_183_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4737..5558
DNA (822bp) protein (274aa)
Trypsin family protein n=3 Tax=Citrobacter RepID=K8ZEE9_9ENTR rbh
Trypsin family protein {ECO:0000313|EMBL:KEL82061.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
serine protease
NECEvent2014_6_7_scaffold_183_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5593..5922)
DNA (330bp) protein (110aa)
Spermidine export protein MdtI n=6 Tax=Citrobacter RepID=J0VLH8_9ENTR
Spermidine export protein MdtI {ECO:0000256|HAMAP-Rule:MF_01597, ECO:0000256|SAAS:SAAS00166084}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteria
multidrug transporter
NECEvent2014_6_7_scaffold_183_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5909..6271)
DNA (363bp) protein (121aa)
Spermidine export protein MdtJ n=6 Tax=Citrobacter RepID=J1FY03_9ENTR
Spermidine export protein MdtJ {ECO:0000256|HAMAP-Rule:MF_01598, ECO:0000256|SAAS:SAAS00166061}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae
multidrug transporter
NECEvent2014_6_7_scaffold_183_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6691..7725
DNA (1035bp) protein (345aa)
AI-2 transporter tqsA n=3 Tax=Citrobacter RepID=J0LTX7_9ENTR rbh
AI-2 transporter tqsA {ECO:0000313|EMBL:ETX70840.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii comp
tqsA; pheromone autoinducer 2 transporter
NECEvent2014_6_7_scaffold_183_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7772..9160)
DNA (1389bp) protein (463aa)
NAD(P) transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000204};; Nicotinamide nucleotide transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}
pntB; pyridine nucleotide transhydrogenase (EC:1.6.1.2)
NAD(P) transhydrogenase subunit beta n=4 Tax=Citrobacter RepID=J1FXT0_9ENTR rbh
NECEvent2014_6_7_scaffold_183_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9171..10700)
DNA (1530bp) protein (510aa)
NAD(P) transhydrogenase subunit alpha {ECO:0000256|PIRNR:PIRNR000203}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000203};; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteria
pntA; NAD(P) transhydrogenase subunit alpha (EC:1.6.1.2)
NAD(P) transhydrogenase subunit alpha n=4 Tax=Citrobacter RepID=J0M044_9ENTR rbh
NECEvent2014_6_7_scaffold_183_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11226..12170
DNA (945bp) protein (315aa)
Protein YdgH n=6 Tax=Citrobacter RepID=J0VLH4_9ENTR rbh
Protein ydgH {ECO:0000313|EMBL:ETX70837.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" so
hypothetical protein
NECEvent2014_6_7_scaffold_183_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12416..13798
DNA (1383bp) protein (461aa)
Arginine/ornithine antiporter n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QYD2_CITFR rbh
Arginine:ornithine antiporter {ECO:0000313|EMBL:KJC12389.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii
arginine:ornithine antiporter
NECEvent2014_6_7_scaffold_183_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13835..14557
DNA (723bp) protein (241aa)
Dihydrofolate reductase folM n=1 Tax=Citrobacter sp. KTE30 RepID=R8UTN7_9ENTR rbh
Dihydrofolate reductase folM {ECO:0000313|EMBL:ETX70835.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freund
dihydromonapterin reductase
NECEvent2014_6_7_scaffold_183_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14554..14889)
DNA (336bp) protein (112aa)
Membrane protein GlpM n=6 Tax=Citrobacter RepID=J1FXS6_9ENTR
Putative inner membrane protein {ECO:0000313|EMBL:CDL41477.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esche
membrane protein
NECEvent2014_6_7_scaffold_183_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14981..15751
DNA (771bp) protein (257aa)
Transcriptional regulatory protein rstA n=3 Tax=Citrobacter RepID=J0M039_9ENTR rbh
Transcriptional regulatory protein rstA {ECO:0000313|EMBL:ETX70833.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citroba
transcriptional regulator
NECEvent2014_6_7_scaffold_183_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15997..17337
DNA (1341bp) protein (447aa)
Transporter, dicarboxylate/amino acid:cation (Na+ or H+) symporter n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3DV53_CITFR rbh
Uncharacterized protein {ECO:0000313|EMBL:ETX70832.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co
L-cystine transporter tcyP
NECEvent2014_6_7_scaffold_183_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17390..18418)
DNA (1029bp) protein (343aa)
Ni2+-Co2+ transporter (NiCoT) family transition metal uptake transporter n=3 Tax=Citrobacter RepID=J0LTW8_9ENTR rbh
Nickel transporter {ECO:0000313|EMBL:KJC09385.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;"
nickel transporter
NECEvent2014_6_7_scaffold_183_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18539..19381)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE30 RepID=R8UTN1_9ENTR rbh
Uncharacterized protein {ECO:0000313|EMBL:ETX70830.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co
streptomycin 3''-kinase
NECEvent2014_6_7_scaffold_183_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19572..20363
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE30 RepID=R8UUA8_9ENTR rbh
Metallo-beta-lactamase superfamily protein {ECO:0000313|EMBL:KEL82075.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" so
beta-lactamase-like protein
NECEvent2014_6_7_scaffold_183_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20390..20734)
DNA (345bp) protein (115aa)
Inner membrane protein n=4 Tax=Citrobacter RepID=J0VLG4_9ENTR
Inner membrane protein {ECO:0000313|EMBL:ETX70828.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii com
cyanate transporter
NECEvent2014_6_7_scaffold_183_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20969..21487
DNA (519bp) protein (173aa)
Membrane protein n=4 Tax=Citrobacter RepID=J1FXY7_9ENTR rbh
Uncharacterized protein {ECO:0000313|EMBL:ETX70827.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co
membrane protein
NECEvent2014_6_7_scaffold_183_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21701..23002
DNA (1302bp) protein (434aa)
Sensor protein RstB n=6 Tax=Citrobacter RepID=J0LTW4_9ENTR rbh
Sensor protein RstB {ECO:0000313|EMBL:KJC09479.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;"
sensor protein RstB
NECEvent2014_6_7_scaffold_183_24
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23076..24005
DNA (930bp) protein (310aa)
DNA replication terminus site-binding protein n=3 Tax=Citrobacter RepID=J1FXR9_9ENTR rbh
DNA replication terminus site-binding protein {ECO:0000256|HAMAP-Rule:MF_00483}; Short=Ter-binding protein {ECO:0000256|HAMAP-Rule:MF_00483};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteob
DNA replication terminus site-binding protein
NECEvent2014_6_7_scaffold_183_25
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24002..25405)
DNA (1404bp) protein (468aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=546 species="Bacteria; Proteoba
fumC; fumarate hydratase (EC:4.2.1.2)
Fumarate hydratase class II n=6 Tax=Citrobacter RepID=J0M028_9ENTR rbh
NECEvent2014_6_7_scaffold_183_26
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25547..27193)
DNA (1647bp) protein (549aa)
Fumarate hydratase class I, aerobic n=6 Tax=Citrobacter RepID=J0VLF9_9ENTR rbh
Fumarate hydratase class I, aerobic {ECO:0000313|EMBL:ETX70823.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter
fumarate hydratase
NECEvent2014_6_7_scaffold_183_27
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27456..28631
DNA (1176bp) protein (392aa)
Mannose-6-phosphate isomerase {ECO:0000256|RuleBase:RU000611}; EC=5.3.1.8 {ECO:0000256|RuleBase:RU000611};; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Ent
Mannose-6-phosphate isomerase n=2 Tax=Citrobacter RepID=J1FXY2_9ENTR rbh
mannose-6-phosphate isomerase
NECEvent2014_6_7_scaffold_183_28
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28738..30246
DNA (1509bp) protein (503aa)
Periplasmic protein n=4 Tax=Citrobacter RepID=J0LTW0_9ENTR rbh
Uncharacterized protein {ECO:0000313|EMBL:KJC12640.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii comple
hypothetical protein
NECEvent2014_6_7_scaffold_183_29
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30294..31322)
DNA (1029bp) protein (343aa)
DNA-binding transcriptional repressor MalI n=2 Tax=Citrobacter RepID=M3D6W0_CITFR rbh
Transcriptional regulator {ECO:0000313|EMBL:KJC09377.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii comp
transcriptional regulator
NECEvent2014_6_7_scaffold_183_30
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31492..33084
DNA (1593bp) protein (531aa)
Bifunctional PTS system maltose and glucose-specific transporter subunits IICB n=2 Tax=Citrobacter RepID=M3BNU2_CITFR rbh
PTS system maltose-and glucose-specific EIICB component {ECO:0000313|EMBL:ETX70819.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citr
bifunctional PTS system maltose and glucose-specific transporter subunits IICB
Displaying items 1-30 of 46 in total

View Taxonomy