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NECEvent2014_6_7_scaffold_199

Alias: 176_007_scaffold_199

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_7_scaffold_199_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..98)
DNA (96bp) protein (32aa)
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:6.3.3.-)
6,7-dimethyl-8-ribityllumazine synthase n=2 Tax=Escherichia coli RepID=M8RAX5_ECOLX
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00
NECEvent2014_6_7_scaffold_199_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(189..1292)
DNA (1104bp) protein (368aa)
ribD; 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC:1.1.1.193 3.5.4.26)
Riboflavin biosynthesis protein RibD n=6 Tax=Citrobacter RepID=J0M7V6_9ENTR rbh
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter
NECEvent2014_6_7_scaffold_199_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1296..1745)
DNA (450bp) protein (150aa)
Transcriptional repressor NrdR n=8 Tax=Citrobacter RepID=C1M7N8_9ENTR
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae
nrdR; transcriptional repressor
NECEvent2014_6_7_scaffold_199_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1899..2438
DNA (540bp) protein (180aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=K8QY58_CITFR rbh
Lipoprotein {ECO:0000313|EMBL:ETX72491.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" sou
hypothetical protein
NECEvent2014_6_7_scaffold_199_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2737..3600
DNA (864bp) protein (288aa)
Nucleoside-specific channel-forming protein Tsx n=11 Tax=Enterobacteriaceae RepID=D4BD54_9ENTR rbh
ion channel protein Tsx
Ion channel protein Tsx {ECO:0000313|EMBL:AHY12237.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co
NECEvent2014_6_7_scaffold_199_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3646..4338)
DNA (693bp) protein (231aa)
DeoR family transcriptional regulator n=4 Tax=Citrobacter RepID=J0VTX9_9ENTR rbh
DeoR-like helix-turn-helix domain protein {ECO:0000313|EMBL:KEL80487.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sou
DeoR faimly transcriptional regulator rbh
NECEvent2014_6_7_scaffold_199_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4362..4727)
DNA (366bp) protein (122aa)
Glyoxalase family protein n=4 Tax=Citrobacter RepID=J0M7W1_9ENTR
Glyoxalase {ECO:0000313|EMBL:KJC08123.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="
glyoxalase
NECEvent2014_6_7_scaffold_199_8
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4897..5868)
DNA (972bp) protein (324aa)
Protein-export membrane protein SecF n=10 Tax=Citrobacter RepID=C1M7N3_9ENTR rbh
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" sour
preprotein translocase subunit SecF
NECEvent2014_6_7_scaffold_199_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5879..7693)
DNA (1815bp) protein (605aa)
Protein translocase subunit SecD n=11 Tax=Citrobacter RepID=K8QY63_CITFR rbh
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter fr
secD; preprotein translocase subunit SecD
NECEvent2014_6_7_scaffold_199_10
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7754..8086)
DNA (333bp) protein (111aa)
Preprotein translocase, YajC subunit n=14 Tax=Enterobacteriaceae RepID=G2S988_ENTAL
preprotein translocase subunit YajC
Preprotein translocase subunit YajC (TC 3.A.5.1.1) {ECO:0000313|EMBL:CEJ66242.1}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobact
NECEvent2014_6_7_scaffold_199_11
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8109..9236)
DNA (1128bp) protein (376aa)
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzym
Queuine tRNA-ribosyltransferase n=11 Tax=Enterobacteriaceae RepID=C1M7N0_9ENTR rbh
NECEvent2014_6_7_scaffold_199_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9292..10362)
DNA (1071bp) protein (357aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};;
queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC:5.-.-.-)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QZV6_CITFR rbh
NECEvent2014_6_7_scaffold_199_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10435..11034
DNA (600bp) protein (200aa)
Acyl carrier protein phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01950}; Short=ACP phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01950};; EC=3.1.4.14 {ECO:0000256|HAMAP-Rule:MF_01950};; TaxID=546 spec
ACP phosphodiesterase (EC:3.1.4.14)
Acyl carrier protein phosphodiesterase n=3 Tax=Citrobacter RepID=J1G534_9ENTR rbh
NECEvent2014_6_7_scaffold_199_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11203..11805
DNA (603bp) protein (201aa)
Uncharacterized protein n=12 Tax=Enterobacteriaceae RepID=C1M7M7_9ENTR rbh
peroxiredoxin
Peroxiredoxin {ECO:0000313|EMBL:KJC08130.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" sourc
NECEvent2014_6_7_scaffold_199_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11927..13795)
DNA (1869bp) protein (623aa)
Amidohydrolase family protein n=5 Tax=Citrobacter RepID=J1G5E3_9ENTR rbh
Amidohydrolase {ECO:0000313|EMBL:KJC08133.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" sour
amidohydrolase
NECEvent2014_6_7_scaffold_199_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13817..14362)
DNA (546bp) protein (182aa)
Antibiotic biosynthesis monooxygenase domain protein n=5 Tax=Citrobacter RepID=J0VTZ0_9ENTR rbh
Antibiotic biosynthesis monooxygenase family protein {ECO:0000313|EMBL:KEL80497.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escheri
antibiotic biosynthesis monooxygenase
NECEvent2014_6_7_scaffold_199_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14536..15177)
DNA (642bp) protein (214aa)
Uncharacterized protein n=9 Tax=Enterobacteriaceae RepID=C1M7M4_9ENTR rbh
Isochorismatase {ECO:0000313|EMBL:ETX72478.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;"
hydrolase
NECEvent2014_6_7_scaffold_199_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15451..16353
DNA (903bp) protein (301aa)
LysR family transcriptional regulator n=3 Tax=Citrobacter RepID=J1G537_9ENTR rbh
Uncharacterized protein {ECO:0000313|EMBL:ETX72477.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co
LysR family transcriptional regulator
NECEvent2014_6_7_scaffold_199_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16347..18164)
DNA (1818bp) protein (606aa)
Maltodextrin glucosidase n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QY73_CITFR rbh
Maltodextrin glucosidase {ECO:0000313|EMBL:ETX72476.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii c
maltodextrin glucosidase
NECEvent2014_6_7_scaffold_199_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18303..19676)
DNA (1374bp) protein (458aa)
Proline-specific permease ProY n=6 Tax=Citrobacter RepID=G9SG29_CITFR rbh
Proline-specific permease ProY {ECO:0000313|EMBL:ETX72475.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freu
proY; proline-specific permease
NECEvent2014_6_7_scaffold_199_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19758..21077)
DNA (1320bp) protein (440aa)
Branched-chain amino acid transport system 2 carrier protein n=8 Tax=Citrobacter RepID=C1M7M0_9ENTR rbh
Branched-chain amino acid transport system 2 carrier protein {ECO:0000313|EMBL:ETX72474.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae;
branched-chain amino acid ABC transporter substrate-binding protein
NECEvent2014_6_7_scaffold_199_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21483..22778)
DNA (1296bp) protein (432aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriac
phoR; phosphate regulon sensor protein (EC:2.7.13.3)
Phosphate regulon sensor protein phoR n=3 Tax=Citrobacter RepID=J0M7X8_9ENTR rbh
NECEvent2014_6_7_scaffold_199_23
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22829..23518)
DNA (690bp) protein (230aa)
Phosphate regulon transcriptional regulatory protein PhoB n=9 Tax=Enterobacteriaceae RepID=I6HHF2_SHIFL rbh
transcriptional regulator PhoB
Transcriptional regulator PhoB {ECO:0000313|EMBL:KKC63613.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobac
NECEvent2014_6_7_scaffold_199_24
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23709..24911
DNA (1203bp) protein (401aa)
Exonuclease subunit SbcD n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3CU36_CITFR rbh
Exonuclease SbcD {ECO:0000313|EMBL:KJC13131.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" so
exonuclease SbcD
NECEvent2014_6_7_scaffold_199_25
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24908..28051
DNA (3144bp) protein (1048aa)
Nuclease sbcCD subunit C n=1 Tax=Citrobacter sp. KTE30 RepID=R8UZ29_9ENTR rbh
Nuclease sbcCD subunit C {ECO:0000313|EMBL:ETX72470.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii c
exonuclease SbcC
NECEvent2014_6_7_scaffold_199_26
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28142..29416
DNA (1275bp) protein (425aa)
Protein AraJ n=3 Tax=Citrobacter RepID=J0VTZ9_9ENTR rbh
Protein AraJ {ECO:0000313|EMBL:ETX72469.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" so
MFS transporter
NECEvent2014_6_7_scaffold_199_27
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29424..30332)
DNA (909bp) protein (303aa)
Fructokinase {ECO:0000313|EMBL:KJC08144.1}; EC=2.7.1.4 {ECO:0000313|EMBL:KJC08144.1};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobac
fructokinase (EC:2.7.1.4)
Fructokinase n=3 Tax=Citrobacter RepID=J0M7Y2_9ENTR rbh
NECEvent2014_6_7_scaffold_199_28
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30424..31335
DNA (912bp) protein (304aa)
Recombination-associated protein RdgC n=8 Tax=Citrobacter RepID=C1M7K9_9ENTR rbh
recombination associated protein
Recombination-associated protein RdgC {ECO:0000256|HAMAP-Rule:MF_00194, ECO:0000256|SAAS:SAAS00073315}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacte
NECEvent2014_6_7_scaffold_199_29
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31385..31669)
DNA (285bp) protein (95aa)
UPF0345 protein CSAG_00170 n=8 Tax=Enterobacteriaceae RepID=C1M7K8_9ENTR
UPF0345 protein YaiE {ECO:0000256|HAMAP-Rule:MF_01537}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexner
hypothetical protein
NECEvent2014_6_7_scaffold_199_30
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31741..32418)
DNA (678bp) protein (226aa)
Aro operon protein n=4 Tax=Citrobacter RepID=J1G5F6_9ENTR rbh
Protein AroM {ECO:0000313|EMBL:ETX72465.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" so
AroM protein
Displaying items 1-30 of 46 in total

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