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NECEvent2014_6_7_scaffold_408

Alias: 176_007_scaffold_408

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_7_scaffold_408_1
unknown

Not on your lists

comp(1..78)
DNA (78bp) protein (26aa)

This feature has no annotations

NECEvent2014_6_7_scaffold_408_trna_1
unknown

Not on your lists

comp(8..92)
DNA (85bp)
transferRNA
NECEvent2014_6_7_scaffold_408_2
Citrobacter youngae, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(242..919)
DNA (678bp) protein (226aa)
Isochorismatase family protein {ECO:0000313|EMBL:EFE08604.1}; EC=3.-.-.- {ECO:0000313|EMBL:EFE08604.1};; TaxID=500640 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterob
Hydrolase, isochorismatase family n=5 Tax=Citrobacter RepID=J1G6V5_9ENTR rbh
nicotinamidase
NECEvent2014_6_7_scaffold_408_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(936..1796)
DNA (861bp) protein (287aa)
Pirin-related protein n=3 Tax=Citrobacter RepID=J0M2Z0_9ENTR rbh
Cytoplasmic protein {ECO:0000313|EMBL:ETX70270.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii comple
quercetin 2,3-dioxygenase
NECEvent2014_6_7_scaffold_408_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1905..2816
DNA (912bp) protein (304aa)
LysR family transcriptional regulator n=2 Tax=Citrobacter RepID=M3CC57_CITFR rbh
Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:KEL82695.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae;
LysR family transcriptional regulator
NECEvent2014_6_7_scaffold_408_5
Pantoea rodasii, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2896..3114)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=256 Tax=cellular organisms RepID=IF1_ENT38
infA; translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1076549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pa
NECEvent2014_6_7_scaffold_408_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3400..4104)
DNA (705bp) protein (235aa)
Leucyl/phenylalanyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088489}; EC=2.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088482};; L/F-transf
aat; leucyl/phenylalanyl-tRNA--protein transferase (EC:2.3.2.6)
Leucyl/phenylalanyl-tRNA--protein transferase n=5 Tax=Citrobacter RepID=J0M9R4_9ENTR rbh
NECEvent2014_6_7_scaffold_408_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4149..5870)
DNA (1722bp) protein (574aa)
Cysteine/glutathione ABC transporter membrane/ATP-binding component n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3CVQ6_CITFR rbh
Amino acid ABC transporter permease {ECO:0000313|EMBL:KJC08721.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter fre
amino acid ABC transporter permease
NECEvent2014_6_7_scaffold_408_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5871..7637)
DNA (1767bp) protein (589aa)
Cysteine/glutathione ABC transporter membrane/ATP-binding component n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3BCU1_CITFR rbh
ATP-binding/permease CydD {ECO:0000313|EMBL:ETX70275.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii
amino acid ABC transporter permease
NECEvent2014_6_7_scaffold_408_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7752..8720)
DNA (969bp) protein (323aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacte
Thioredoxin reductase n=4 Tax=Citrobacter RepID=K8QVQ8_CITFR rbh
thioredoxin reductase
NECEvent2014_6_7_scaffold_408_10
Enterobacter cancerogenus, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9268..9762
DNA (495bp) protein (165aa)
Leucine-responsive regulatory protein n=28 Tax=Enterobacteriaceae RepID=LRP_KLEPN
Leucine-responsive regulatory protein
Leucine responsive regulatory protein {ECO:0000313|EMBL:EFC58020.1}; TaxID=500639 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobac
NECEvent2014_6_7_scaffold_408_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9897..13916
DNA (4020bp) protein (1340aa)
DNA translocase FtsK n=3 Tax=Citrobacter RepID=R1FDZ9_CITFR rbh
Cell division protein FtsK {ECO:0000313|EMBL:KJC08733.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii com
cell division protein FtsK
NECEvent2014_6_7_scaffold_408_12
Citrobacter youngae, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14028..14639
DNA (612bp) protein (204aa)
Outer-membrane lipoprotein carrier protein n=7 Tax=Citrobacter RepID=C1M9H7_9ENTR rbh
Outer-membrane lipoprotein carrier protein {ECO:0000256|HAMAP-Rule:MF_00240, ECO:0000256|SAAS:SAAS00028972}; Flags: Precursor;; TaxID=500640 species="Bacteria; Proteobacteria; Gammaproteobacteria; Ent
lolA; lipoprotein chaperone
NECEvent2014_6_7_scaffold_408_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14650..15993
DNA (1344bp) protein (448aa)
Replication-associated recombination protein A n=4 Tax=Citrobacter RepID=C1M9H8_9ENTR rbh
Replication-associated recombination protein A {ECO:0000313|EMBL:ETX70280.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter;
recombination factor protein RarA
NECEvent2014_6_7_scaffold_408_14
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16086..17378
DNA (1293bp) protein (431aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000
Serine--tRNA ligase n=3 Tax=Citrobacter RepID=J0VVP7_9ENTR rbh
seryl-tRNA synthetase
NECEvent2014_6_7_scaffold_408_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17615..19261
DNA (1647bp) protein (549aa)
Anaerobic dimethyl sulfoxide reductase n=3 Tax=Citrobacter RepID=J0M9S5_9ENTR
Dimethyl sulfoxide reductase {ECO:0000313|EMBL:KJC08714.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii c
dimethyl sulfoxide reductase
NECEvent2014_6_7_scaffold_408_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19262..20059
DNA (798bp) protein (266aa)
Anaerobic dimethyl sulfoxide reductase chain A {ECO:0000313|EMBL:CDL37217.1}; EC=1.8.99.- {ECO:0000313|EMBL:CDL37217.1};; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enteroba
Anaerobic dimethyl sulfoxide reductase subunit A n=2 Tax=Citrobacter RepID=K8QXC4_CITFR
dimethyl sulfoxide reductase
NECEvent2014_6_7_scaffold_408_17
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20070..20687
DNA (618bp) protein (206aa)
Dimethylsulfoxide reductase, chain B n=5 Tax=Citrobacter RepID=J1G6X1_9ENTR rbh
Anaerobic dimethyl sulfoxide reductase chain B {ECO:0000313|EMBL:EOQ50514.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;
dimethyl sulfoxide reductase
NECEvent2014_6_7_scaffold_408_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20689..21552
DNA (864bp) protein (288aa)
Anaerobic dimethyl sulfoxide reductase subunit C n=5 Tax=Citrobacter RepID=J0M308_9ENTR rbh
Dimethyl sulfoxide reductase {ECO:0000313|EMBL:KJC08712.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii c
dimethyl sulfoxide reductase
NECEvent2014_6_7_scaffold_408_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21662..22288)
DNA (627bp) protein (209aa)
Protein YcaC n=6 Tax=Citrobacter RepID=J1G728_9ENTR rbh
Hydrolase {ECO:0000313|EMBL:ETX70285.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" sourc
hypothetical protein
NECEvent2014_6_7_scaffold_408_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22674..23822
DNA (1149bp) protein (383aa)
Uncharacterized MFS-type transporter WYG_0521 n=3 Tax=Citrobacter RepID=J0M9T0_9ENTR rbh
Uncharacterized MFS-type transporter TN42_17250 {ECO:0000256|HAMAP-Rule:MF_01149}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter;
MFS transporter
NECEvent2014_6_7_scaffold_408_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24036..25457
DNA (1422bp) protein (474aa)
Inner membrane transporter ycaM n=8 Tax=Citrobacter RepID=C1M9I5_9ENTR rbh
Transporter {ECO:0000313|EMBL:KJC08580.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source=
transporter
NECEvent2014_6_7_scaffold_408_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25501..26241)
DNA (741bp) protein (247aa)
pflA; pyruvate formate lyase-activating enzyme 1 (EC:1.97.1.4)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobact
Pyruvate formate-lyase 1-activating enzyme n=11 Tax=Citrobacter RepID=D4BBW4_9ENTR rbh
NECEvent2014_6_7_scaffold_408_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26427..27191)
DNA (765bp) protein (255aa)
pyruvate formate-lyase (EC:2.3.1.54)
Formate acetyltransferase 1 n=9 Tax=Citrobacter RepID=C1M9I8_9ENTR
Formate acetyltransferase 1 {ECO:0000313|EMBL:ETX70290.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundi
Displaying 24 items

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