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NECEvent2014_6_7_scaffold_428

Alias: 176_007_scaffold_428

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_7_scaffold_428_trna_1
unknown

Not on your lists

6..89
DNA (84bp)
transferRNA
NECEvent2014_6_7_scaffold_428_1
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(202..546)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE30 RepID=R8UW67_9ENTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJC08786.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii comple
NECEvent2014_6_7_scaffold_428_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

751..1440
DNA (690bp) protein (230aa)
Uncharacterized protein n=3 Tax=Citrobacter RepID=J0VM31_9ENTR rbh
Membrane protein {ECO:0000313|EMBL:KJC08785.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" so
membrane protein
NECEvent2014_6_7_scaffold_428_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1454..1924
DNA (471bp) protein (157aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=K8QT55_CITFR rbh
Polyketide cyclase {ECO:0000313|EMBL:KJC10342.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;"
hypothetical protein
NECEvent2014_6_7_scaffold_428_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1944..2969)
DNA (1026bp) protein (342aa)
Patatin n=2 Tax=Citrobacter RepID=K8QXS5_CITFR rbh
Uncharacterized protein {ECO:0000313|EMBL:ETX69281.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co
patatin
NECEvent2014_6_7_scaffold_428_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3301..4443
DNA (1143bp) protein (381aa)
Transglutaminase domain-containing protein n=3 Tax=Citrobacter RepID=J1FYE1_9ENTR rbh
Uncharacterized protein {ECO:0000313|EMBL:ETX69280.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co
hypothetical protein
NECEvent2014_6_7_scaffold_428_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4774..5055
DNA (282bp) protein (94aa)
Heavy metal transport/detoxification protein n=3 Tax=Citrobacter RepID=J0VM26_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX63438.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co
heavy metal transporter
NECEvent2014_6_7_scaffold_428_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5265..5930
DNA (666bp) protein (222aa)
Protein translocase subunit secA n=5 Tax=Citrobacter RepID=G9SKT1_CITFR rbh
Uncharacterized protein {ECO:0000313|EMBL:KDF14427.1}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co
hypothetical protein
NECEvent2014_6_7_scaffold_428_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5957..7168)
DNA (1212bp) protein (404aa)
Tyrosine transporter TyrP n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QT58_CITFR rbh
Tyrosine-specific transport protein {ECO:0000313|EMBL:CDL38857.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="E
tyrosine transporter TyrP
NECEvent2014_6_7_scaffold_428_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7395..7634
DNA (240bp) protein (80aa)
Uncharacterized protein n=8 Tax=Citrobacter RepID=C1M5T1_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX63435.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co
hypothetical protein
NECEvent2014_6_7_scaffold_428_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7680..8177)
DNA (498bp) protein (166aa)
Ferritin {ECO:0000256|RuleBase:RU361145}; EC=1.16.3.2 {ECO:0000256|RuleBase:RU361145};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Esc
Ferritin-1 n=7 Tax=Citrobacter RepID=C1M5T0_9ENTR rbh
ferritin
NECEvent2014_6_7_scaffold_428_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8372..8707)
DNA (336bp) protein (112aa)
Outer membrane lipoprotein n=6 Tax=Citrobacter RepID=J0VM20_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX69274.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co
hypothetical protein
NECEvent2014_6_7_scaffold_428_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8975..9613
DNA (639bp) protein (213aa)
Uncharacterized protein n=7 Tax=Citrobacter RepID=C1M5S7_9ENTR rbh
Uncharacterized protein {ECO:0000313|EMBL:KJC08775.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii comple
hypothetical protein
NECEvent2014_6_7_scaffold_428_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9647..11068)
DNA (1422bp) protein (474aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE30 RepID=R8URZ1_9ENTR rbh
Permeases of the major facilitator superfamily {ECO:0000313|EMBL:CDL38850.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;
major facilitator transporter
NECEvent2014_6_7_scaffold_428_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11199..11450
DNA (252bp) protein (84aa)
Uncharacterized protein n=6 Tax=Citrobacter RepID=J1FYD2_9ENTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEL81351.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_6_7_scaffold_428_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11590..12093)
DNA (504bp) protein (168aa)
Ferritin-like protein 2 n=6 Tax=Citrobacter RepID=C1M5S4_9ENTR rbh
Ferritin-like domain protein {ECO:0000313|EMBL:KEL81352.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheric
ferritin
NECEvent2014_6_7_scaffold_428_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12647..13204
DNA (558bp) protein (186aa)
Uncharacterized protein n=4 Tax=Citrobacter RepID=J0VM16_9ENTR rbh
DJ-1/YajL/PfpI superfamily, includes chaperone protein YajL (Former ThiJ), parkinsonism-associated protein DJ-1, peptidases PfpI, Hsp31 {ECO:0000313|EMBL:CDL38846.1}; TaxID=1432557 species="Bacteria;
thiamine biosynthesis protein ThiJ
NECEvent2014_6_7_scaffold_428_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13520..14509
DNA (990bp) protein (330aa)
L-arabinose-binding periplasmic protein n=7 Tax=Citrobacter RepID=J1FYJ7_9ENTR rbh
L-arabinose-binding periplasmic protein {ECO:0000256|PIRNR:PIRNR002816}; Short=ABP {ECO:0000256|PIRNR:PIRNR002816};; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteri
sugar ABC transporter substrate-binding protein
NECEvent2014_6_7_scaffold_428_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14625..16139
DNA (1515bp) protein (505aa)
Arabinose import ATP-binding protein AraG {ECO:0000256|HAMAP-Rule:MF_01721}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01721};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enter
araG; L-arabinose transporter ATP-binding protein (EC:3.6.3.17)
Arabinose import ATP-binding protein AraG n=1 Tax=Citrobacter sp. KTE30 RepID=R8URY6_9ENTR rbh
NECEvent2014_6_7_scaffold_428_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16154..17140
DNA (987bp) protein (329aa)
L-arabinose transporter permease {ECO:0000313|EMBL:KJC08768.1}; EC=3.6.3.17 {ECO:0000313|EMBL:KJC08768.1};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterob
araH; L-arabinose transporter permease (EC:3.6.3.17)
L-arabinose transport system permease AraH n=7 Tax=Citrobacter RepID=G9SKR9_CITFR rbh
NECEvent2014_6_7_scaffold_428_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17316..18119
DNA (804bp) protein (268aa)
Trehalose 6-phosphate phosphatase {ECO:0000256|RuleBase:RU361117}; EC=3.1.3.12 {ECO:0000256|RuleBase:RU361117};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales
Trehalose-phosphate phosphatase n=3 Tax=Citrobacter RepID=J0M0N2_9ENTR rbh
trehalose phosphatase
NECEvent2014_6_7_scaffold_428_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18094..19515
DNA (1422bp) protein (474aa)
Alpha,alpha-trehalose-phosphate synthase (UDP-forming) {ECO:0000256|RuleBase:RU362045}; EC=2.4.1.15 {ECO:0000256|RuleBase:RU362045};; Osmoregulatory trehalose synthesis protein A {ECO:0000256|RuleBase
Trehalose-6-phosphate synthase n=3 Tax=Citrobacter RepID=J0VM11_9ENTR rbh
trehalose-6-phosphate synthase
NECEvent2014_6_7_scaffold_428_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19533..19961)
DNA (429bp) protein (143aa)
Universal stress protein n=6 Tax=Citrobacter RepID=J1FYJ3_9ENTR
Universal stress protein {ECO:0000256|PIRNR:PIRNR006276}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii com
universal stress protein UspC
NECEvent2014_6_7_scaffold_428_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20755..21096
DNA (342bp) protein (114aa)
Flagellar transcriptional regulator FlhD n=8 Tax=Citrobacter RepID=D4B895_9ENTR
transcriptional regulator
Flagellar transcriptional regulator FlhD {ECO:0000256|HAMAP-Rule:MF_00725, ECO:0000256|SAAS:SAAS00011626}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Ente
NECEvent2014_6_7_scaffold_428_24
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21096..21677
DNA (582bp) protein (194aa)
Flagellar transcriptional regulator FlhC n=8 Tax=Citrobacter RepID=C1M5R5_9ENTR rbh
Flagellar transcriptional regulator FlhC {ECO:0000256|HAMAP-Rule:MF_01891, ECO:0000256|PIRNR:PIRNR003159}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Ente
transcriptional regulator
NECEvent2014_6_7_scaffold_428_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21802..22689
DNA (888bp) protein (296aa)
Motility protein A n=8 Tax=Citrobacter RepID=C1M5R4_9ENTR rbh
Flagellar motor stator protein MotA {ECO:0000313|EMBL:KEL81362.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="E
flagellar motor protein MotA
NECEvent2014_6_7_scaffold_428_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22686..23615
DNA (930bp) protein (310aa)
Motility protein B n=8 Tax=Citrobacter RepID=C1M5R3_9ENTR rbh
Flagellar motor rotation protein MotB {ECO:0000313|EMBL:CDL38832.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source=
motB; flagellar motor protein MotB
NECEvent2014_6_7_scaffold_428_27
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23620..25656
DNA (2037bp) protein (679aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae;
Chemotaxis protein CheA n=5 Tax=Citrobacter RepID=J1FYI9_9ENTR rbh
chemotaxis protein CheA
NECEvent2014_6_7_scaffold_428_28
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25677..25781
DNA (105bp) protein (35aa)
Purine-binding chemotaxis protein n=3 Tax=Citrobacter RepID=K8QT83_CITFR
chemotaxis protein CheW
CheW-like domain protein {ECO:0000313|EMBL:EIQ75031.1}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexner
Displaying 29 items

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