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NECEvent2014_6_7_scaffold_539

Alias: 176_007_scaffold_539

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_7_scaffold_539_1
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(206..970)
DNA (765bp) protein (255aa)
Inner membrane protein YfcA n=4 Tax=Citrobacter RepID=J0VNW9_9ENTR rbh
Uncharacterized protein {ECO:0000313|EMBL:KJC13727.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii comple
hypothetical protein
NECEvent2014_6_7_scaffold_539_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1269..1544
DNA (276bp) protein (92aa)
Uncharacterized protein n=9 Tax=Enterobacteriaceae RepID=C1MBU0_9ENTR
UPF0379 protein yjfY {ECO:0000313|EMBL:CDL39668.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli
membrane protein
NECEvent2014_6_7_scaffold_539_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1677..2363)
DNA (687bp) protein (229aa)
L-ribulose-5-phosphate 4-epimerase UlaF {ECO:0000256|HAMAP-Rule:MF_01952}; EC=5.1.3.4 {ECO:0000256|HAMAP-Rule:MF_01952};; L-ascorbate utilization protein F {ECO:0000256|HAMAP-Rule:MF_01952}; Phosphori
araD; ribulose 5-phosphate epimerase (EC:5.1.3.4)
L-ribulose-5-phosphate 4-epimerase n=2 Tax=Citrobacter freundii RepID=K8QS47_CITFR rbh
NECEvent2014_6_7_scaffold_539_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2363..3217)
DNA (855bp) protein (285aa)
L-xylulose 5-phosphate 3-epimerase n=2 Tax=Citrobacter freundii RepID=K8R0H7_CITFR rbh
Xylulose 5-phosphate 3-epimerase {ECO:0000313|EMBL:KJC07800.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freund
xylulose 5-phosphate 3-epimerase
NECEvent2014_6_7_scaffold_539_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3227..3877)
DNA (651bp) protein (217aa)
ulaD; 3-keto-L-gulonate-6-phosphate decarboxylase (EC:4.1.1.85)
3-keto-L-gulonate-6-phosphate decarboxylase ulaD n=8 Tax=Citrobacter RepID=C1MBT7_9ENTR rbh
3-keto-L-gulonate-6-phosphate decarboxylase ulaD {ECO:0000313|EMBL:ETX65444.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter
NECEvent2014_6_7_scaffold_539_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3890..4357)
DNA (468bp) protein (156aa)
Ascorbate-specific phosphotransferase enzyme IIA component n=2 Tax=Citrobacter RepID=C1MBT6_9ENTR rbh
Ascorbate-specific phosphotransferase enzyme IIA component {ECO:0000313|EMBL:ETX65443.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; C
PTS ascorbate-specific transporter subunit IIA
NECEvent2014_6_7_scaffold_539_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4368..4673)
DNA (306bp) protein (102aa)
Ascorbate-specific phosphotransferase enzyme IIB component n=9 Tax=Enterobacteriaceae RepID=C1MBT5_9ENTR
PTS system L-ascorbate-specific transporter subunit IIB {ECO:0000313|EMBL:KJC07803.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobac
sgaB; L-ascorbate-specific enzyme IIB component of PTS
NECEvent2014_6_7_scaffold_539_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4689..6086)
DNA (1398bp) protein (466aa)
Ascorbate-specific PTS system enzyme IIC n=6 Tax=Citrobacter RepID=J1G083_9ENTR rbh
PTS ascorbate transporter subunit IIC {ECO:0000313|EMBL:KJC13734.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter f
PTS ascorbate transporter subunit IIC
NECEvent2014_6_7_scaffold_539_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6454..7518
DNA (1065bp) protein (355aa)
Probable L-ascorbate-6-phosphate lactonase UlaG {ECO:0000256|HAMAP-Rule:MF_01266}; EC=3.1.1.- {ECO:0000256|HAMAP-Rule:MF_01266};; L-ascorbate utilization protein G {ECO:0000256|HAMAP-Rule:MF_01266}; T
Probable L-ascorbate-6-phosphate lactonase UlaG n=8 Tax=Citrobacter RepID=C1MBT3_9ENTR rbh
ascorbate 6-phosphate lactonase
NECEvent2014_6_7_scaffold_539_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7625..8380
DNA (756bp) protein (252aa)
HTH-type transcriptional regulator UlaR n=5 Tax=Citrobacter RepID=C1MBT2_9ENTR rbh
HTH-type transcriptional regulator UlaR {ECO:0000256|HAMAP-Rule:MF_01563}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" s
transcriptional repressor UlaR
NECEvent2014_6_7_scaffold_539_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8377..9126)
DNA (750bp) protein (250aa)
Esterase n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3CIM3_CITFR rbh
Esterase {ECO:0000313|EMBL:KJC13737.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Ci
esterase
NECEvent2014_6_7_scaffold_539_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9335..9637
DNA (303bp) protein (101aa)
Biofilm stress and motility protein A n=6 Tax=Citrobacter RepID=K8QWQ6_CITFR
Biofilm stress and motility protein A {ECO:0000313|EMBL:KJC07808.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter f
biofilm stress and motility protein A
NECEvent2014_6_7_scaffold_539_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9785..10060
DNA (276bp) protein (92aa)
Inner membrane protein n=3 Tax=Citrobacter RepID=K8ZEK1_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KEL78967.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
membrane protein
NECEvent2014_6_7_scaffold_539_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10146..11768)
DNA (1623bp) protein (541aa)
Isovaleryl CoA dehydrogenase n=1 Tax=Citrobacter sp. KTE30 RepID=R8V6V0_9ENTR rbh
Isovaleryl-CoA dehydrogenase {ECO:0000313|EMBL:KJC07810.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii c
isovaleryl-CoA dehydrogenase
NECEvent2014_6_7_scaffold_539_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11853..13019)
DNA (1167bp) protein (389aa)
Synthetase amidase n=3 Tax=Citrobacter RepID=J1G0G3_9ENTR rbh
Synthetase/amidase {ECO:0000313|EMBL:ETX71862.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex
yjfC; synthetase/amidase
NECEvent2014_6_7_scaffold_539_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13022..13663)
DNA (642bp) protein (214aa)
Inner membrane protein n=3 Tax=Citrobacter RepID=J0VNY1_9ENTR rbh
Uncharacterized protein {ECO:0000313|EMBL:ETX71861.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co
hypothetical protein
NECEvent2014_6_7_scaffold_539_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13673..14071)
DNA (399bp) protein (133aa)
UPF0719 inner membrane protein yjfL n=3 Tax=Citrobacter RepID=J0M2L3_9ENTR
Inner membrane protein {ECO:0000313|EMBL:ETX71860.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii com
membrane protein
NECEvent2014_6_7_scaffold_539_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14091..14750)
DNA (660bp) protein (220aa)
Cytoplasmic protein n=3 Tax=Citrobacter RepID=J1G092_9ENTR rbh
Uncharacterized protein {ECO:0000313|EMBL:ETX71859.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co
hypothetical protein
NECEvent2014_6_7_scaffold_539_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14809..15507)
DNA (699bp) protein (233aa)
Pspa im30 family protein n=3 Tax=Citrobacter RepID=J0LWA1_9ENTR rbh
Transcriptional regulator effector protein {ECO:0000313|EMBL:ETX71858.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citr
yjfJ; hypothetical protein
NECEvent2014_6_7_scaffold_539_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15523..15927)
DNA (405bp) protein (135aa)
Cytoplasmic protein n=3 Tax=Citrobacter RepID=J1G0G7_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX71857.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co
yjfI; hypothetical protein
NECEvent2014_6_7_scaffold_539_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16043..16774)
DNA (732bp) protein (244aa)
23S rRNA (guanosine-2'-O-)-methyltransferase RlmB {ECO:0000256|HAMAP-Rule:MF_01887}; EC=2.1.1.185 {ECO:0000256|HAMAP-Rule:MF_01887};; 23S rRNA (guanosine2251 2'-O)-methyltransferase {ECO:0000256|HAMAP
23S rRNA (guanosine-2'-O-)-methyltransferase RlmB n=6 Tax=Citrobacter RepID=J0VNY6_9ENTR rbh
23S rRNA methyltransferase
NECEvent2014_6_7_scaffold_539_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16845..19307)
DNA (2463bp) protein (821aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1444046 species="Bacteria; Proteobacteria; Gam
Ribonuclease R n=4 Tax=Citrobacter RepID=J0M2L7_9ENTR rbh
exoribonuclease R
NECEvent2014_6_7_scaffold_539_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19464..19889)
DNA (426bp) protein (142aa)
HTH-type transcriptional repressor NsrR n=9 Tax=Citrobacter RepID=J1G097_9ENTR
HTH-type transcriptional repressor NsrR {ECO:0000256|HAMAP-Rule:MF_01177, ECO:0000256|SAAS:SAAS00010440}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobac
transcriptional repressor NsrR
NECEvent2014_6_7_scaffold_539_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20106..21404)
DNA (1299bp) protein (433aa)
adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.
Adenylosuccinate synthetase n=11 Tax=Citrobacter RepID=C1MBS3_9ENTR rbh
Displaying 24 items

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