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NECEvent2014_6_7_scaffold_11_1

Organism: NECEvent2014_6_7_Citrobacter_freundii-rel_52_48_partial

partial RP 20 / 55 MC: 2 BSCG 19 / 51 ASCG 9 / 38 MC: 2
Location: comp(418..1665)

Top 3 Functional Annotations

Value Algorithm Source
Type II secretion system protein n=3 Tax=Bacteria RepID=J0VRW9_9ENTR similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 415.0
  • Bit_score: 792
  • Evalue 2.10e-226
  • rbh
Porin {ECO:0000313|EMBL:KJC05392.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citro similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 415.0
  • Bit_score: 792
  • Evalue 2.90e-226
hofQ; porin similarity KEGG
DB: KEGG
  • Identity: 92.8
  • Coverage: 415.0
  • Bit_score: 738
  • Evalue 1.00e-210

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Taxonomy

Citrobacter freundii → Citrobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1248
ATGAAGCGATGGATAGCGTTGATAGTAATGGCACTGGCGGTCGGGATAACGAGCGCGCTGGCGACGAAACCGCAAAACGTGACGCTGGTGGTCGATGATGTGCCGGTTACGCAGGTATTGCAGGCGCTGGCTGAACAGGAACAAAAAAACCTGGTGGTTTCGCCGGATGTCAGCGGTGTGCTGTCGCTGCATTTGACGGATGTCCCCTGGAAGCAGGCATTGCAGACGGTGGTAAAAAGTGCCGGGCTGGTATTACGTCAGGAAGGCAACGTCCTGCATGTGCATTCTGTTCAATGGCAGAGTGAAAATGCGGCTCGTCAGGAAAACGAGCAGGCGCGGATTCAGGCTAGTCTTCCGCTGGAACATCGCAGCATCATTTTGCACTATGCTGATGCCACCGAGCTGGTAAAAGCCGGAGAAAAGCTGCTCAGTGCTAAAGGAAGCATGACGGTGGATAAACGAACCAACCGCTTACTGCTGCGTGACAATCGTGTTGTTCTCGACACCCTGGAAACGTGGGTAGCGCAAATGGATTTGCCAGTTGCCCAGGTTGAACTGGCGGCGCATATCGTCACCATTAATGAAAAAAGTTTGCGTGAGCTGGGGGTGAAGTGGTCACTGGCTGACGCACAACAACCGGGGGCGGTTGGGAATGTCACAACGCTTGCCAGCGATCTCTCTGTAGCCACCGCCACATCCCGTGTGGGATTTAACATTGGCCGTATTAACGGTCGTTTACTGGAACTGGAGTTGTCTGCGCTGGAGCAAAAACAGCAACTGGATATCATTGCCAGTCCACGATTACTGGCATCTCACCTGCAACCTGCCAGTATTAAGCAGGGCAGTGAGATCCCTTATCAGGTCTCCAGCGGTGAAAGCGGTGCGACATCCGTCGAGTTCAAGGAAGCGGTACTGGGGATGGAGGTGACGCCAACGGTGTTGCAGAAAGGGAGAATCAGGCTGAAACTGCATATCAGCCAGAATGTTCCGGGACAGGTTCTACAACAGGCAGATGGCGAAGTGCTGGCTATCGACAAGCAAGAGATTGAAACGCAGGTCGAGGTAAGAAGCGGCGAGACGATTGCGCTTGGCGGGATTTTTTCACATAAGAATAAATCCGCAGCCGACAGCGTGCCGCTATTAGGCGACATTCCCTGGCTTGGCTCTCTTTTTCGCCATGATGGTAAAGAAGATGAACGGCGCGAATTAGTGGTCTTTATTACGCCCAGACTGGTTTCAACGGAATAA
PROTEIN sequence
Length: 416
MKRWIALIVMALAVGITSALATKPQNVTLVVDDVPVTQVLQALAEQEQKNLVVSPDVSGVLSLHLTDVPWKQALQTVVKSAGLVLRQEGNVLHVHSVQWQSENAARQENEQARIQASLPLEHRSIILHYADATELVKAGEKLLSAKGSMTVDKRTNRLLLRDNRVVLDTLETWVAQMDLPVAQVELAAHIVTINEKSLRELGVKWSLADAQQPGAVGNVTTLASDLSVATATSRVGFNIGRINGRLLELELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVRSGETIALGGIFSHKNKSAADSVPLLGDIPWLGSLFRHDGKEDERRELVVFITPRLVSTE*