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NECEvent2014_6_7_scaffold_11

Alias: 176_007_scaffold_11

Search features with annotation key words

Displaying items 1-30 of 127 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_7_scaffold_11_1
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(418..1665)
DNA (1248bp) protein (416aa)
Type II secretion system protein n=3 Tax=Bacteria RepID=J0VRW9_9ENTR rbh
Porin {ECO:0000313|EMBL:KJC05392.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citro
hofQ; porin
NECEvent2014_6_7_scaffold_11_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1971..2297)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QS95_CITFR
Membrane protein {ECO:0000313|EMBL:KJC08986.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" so
membrane protein
NECEvent2014_6_7_scaffold_11_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2410..2949)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QU26_CITFR rbh
Uncharacterized protein {ECO:0000313|EMBL:ETX67345.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co
DNA utilization protein HofN
NECEvent2014_6_7_scaffold_11_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2949..3728)
DNA (780bp) protein (260aa)
Periplasmic protein n=3 Tax=Citrobacter RepID=J0LZ68_9ENTR rbh
DNA utilization protein HofM {ECO:0000313|EMBL:KJC08984.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii c
DNA utilization protein HofM
NECEvent2014_6_7_scaffold_11_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3849..6401
DNA (2553bp) protein (851aa)
Penicillin-binding protein 1A {ECO:0000313|EMBL:KEL80078.1}; EC=3.4.-.- {ECO:0000313|EMBL:KEL80078.1};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterob
Penicillin-binding protein 1a n=3 Tax=Citrobacter RepID=K8QVN6_CITFR rbh
mrcA; penicillin-binding protein 1A
NECEvent2014_6_7_scaffold_11_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6457..7017)
DNA (561bp) protein (187aa)
Adp-ribose diphosphatase n=5 Tax=Citrobacter RepID=J0VRX6_9ENTR rbh
Adenosine nucleotide hydrolase {ECO:0000313|EMBL:KJC08982.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii
nudE; adenosine nucleotide hydrolase
NECEvent2014_6_7_scaffold_11_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7340..9475
DNA (2136bp) protein (712aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=R1FQ13_CITFR rbh
Intracellular growth attenuator protein igaA {ECO:0000313|EMBL:ETX67349.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Ci
Intracellular growth attenuator protein igaA
NECEvent2014_6_7_scaffold_11_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9538..10206
DNA (669bp) protein (223aa)
HAD hydrolase, family IA n=8 Tax=Citrobacter RepID=C1MD74_9ENTR rbh
Hydrolase {ECO:0000313|EMBL:ETX67350.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" sourc
nucleotidase
NECEvent2014_6_7_scaffold_11_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10217..10618
DNA (402bp) protein (134aa)
ribosome-associated heat shock protein Hsp15 n=1 Tax=Citrobacter freundii RepID=UPI00031B7C48
ribosome-associated heat shock protein Hsp15
Heat shock protein 15 {ECO:0000256|PIRNR:PIRNR016821}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co
NECEvent2014_6_7_scaffold_11_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10643..11521
DNA (879bp) protein (293aa)
33 kDa chaperonin n=7 Tax=Citrobacter RepID=G9SBB3_CITFR rbh
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=546 species="Bacteria; Proteobacteria; Gammap
hslO; Hsp33-like chaperonin
NECEvent2014_6_7_scaffold_11_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11626..13344)
DNA (1719bp) protein (573aa)
Inner membrane protein n=3 Tax=Citrobacter RepID=J0VRY0_9ENTR rbh
Uncharacterized protein {ECO:0000313|EMBL:KEL80071.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
membrane protein
NECEvent2014_6_7_scaffold_11_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13723..15345
DNA (1623bp) protein (541aa)
phosphoenolpyruvate carboxykinase (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] n=9 Tax=Citrobacter RepID=C1MD78_9ENTR rbh
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:00
NECEvent2014_6_7_scaffold_11_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15468..15785
DNA (318bp) protein (106aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=M3C7P1_CITFR
Toxin HigB-2 {ECO:0000313|EMBL:KJC08976.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source
hypothetical protein
NECEvent2014_6_7_scaffold_11_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15838..16134
DNA (297bp) protein (99aa)
HTH-type transcriptional regulator yiaG n=3 Tax=Citrobacter RepID=K8R0B4_CITFR
XRE family transcriptional regulator {ECO:0000313|EMBL:KJC08975.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter fr
HTH-type transcriptional regulator yiaG
NECEvent2014_6_7_scaffold_11_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16191..17543)
DNA (1353bp) protein (451aa)
Osmolarity sensor protein n=3 Tax=Citrobacter RepID=K8QVM6_CITFR rbh
Osmolarity sensor protein {ECO:0000313|EMBL:KJC05404.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii comp
envZ; osmolarity sensor protein
NECEvent2014_6_7_scaffold_11_16
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17540..18259)
DNA (720bp) protein (240aa)
Transcriptional regulatory protein OmpR n=2244 Tax=Bacteria RepID=OMPR_ECO57
ompR; two-component response regulator OmpR
Osmolarity response regulator {ECO:0000313|EMBL:ESB72197.1}; TaxID=1124963 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonel
NECEvent2014_6_7_scaffold_11_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18485..18958
DNA (474bp) protein (158aa)
Transcription elongation factor GreB n=9 Tax=Citrobacter RepID=C1MD81_9ENTR rbh
greB; transcription elongation factor GreB
Transcription elongation factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; Transcript cleavage factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteob
NECEvent2014_6_7_scaffold_11_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19057..21375
DNA (2319bp) protein (773aa)
Protein yhgF n=1 Tax=Citrobacter sp. KTE30 RepID=R8UJD5_9ENTR rbh
Protein yhgF {ECO:0000313|EMBL:KEL80066.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-0
transcription accessory protein
NECEvent2014_6_7_scaffold_11_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21751..21978
DNA (228bp) protein (76aa)
Ferrous iron transporter A n=12 Tax=Enterobacteriaceae RepID=C1MD83_9ENTR
feoA; ferrous iron transporter A
Ferrous iron transport protein A {ECO:0000313|EMBL:CDL41379.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esch
NECEvent2014_6_7_scaffold_11_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21997..24315
DNA (2319bp) protein (773aa)
Ferrous iron transporter B n=5 Tax=Citrobacter RepID=J1G341_9ENTR rbh
Ferrous iron transport protein B {ECO:0000313|EMBL:KEL80064.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esch
feoB; ferrous iron transporter B
NECEvent2014_6_7_scaffold_11_21
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24327..24563
DNA (237bp) protein (79aa)
Ferrous iron transport protein C n=11 Tax=Enterobacteriaceae RepID=C1MD85_9ENTR
Ferrous iron transport protein C {ECO:0000256|HAMAP-Rule:MF_01586, ECO:0000256|SAAS:SAAS00010729}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteri
ferrous iron transporter C
NECEvent2014_6_7_scaffold_11_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24809..25759
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3DEQ1_CITFR rbh
Transposase {ECO:0000313|EMBL:ETX67362.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" sou
hypothetical protein
NECEvent2014_6_7_scaffold_11_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25805..26575)
DNA (771bp) protein (257aa)
Pimeloyl-[acyl-carrier protein] methyl ester esterase {ECO:0000256|HAMAP-Rule:MF_01260, ECO:0000256|SAAS:SAAS00064125}; EC=3.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01260, ECO:0000256|SAAS:SAAS00064111};; B
carboxylesterase (EC:3.1.1.1)
Pimelyl-[acyl-carrier protein] methyl ester esterase n=3 Tax=Citrobacter RepID=J0VRZ0_9ENTR rbh
NECEvent2014_6_7_scaffold_11_24
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26613..27296
DNA (684bp) protein (228aa)
DNA utilization protein GntX n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3B8S6_CITFR rbh
Protein GntX {ECO:0000313|EMBL:ETX67364.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" so
DNA utilization protein GntX
NECEvent2014_6_7_scaffold_11_25
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27355..27930
DNA (576bp) protein (192aa)
Fe/S biogenesis protein NfuA n=10 Tax=Citrobacter RepID=C1MD89_9ENTR rbh
Fe/S biogenesis protein NfuA
Fe/S biogenesis protein NfuA {ECO:0000256|HAMAP-Rule:MF_01637, ECO:0000256|SAAS:SAAS00035357}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae
NECEvent2014_6_7_scaffold_11_26
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28298..29614
DNA (1317bp) protein (439aa)
High-affinity gluconate transporter n=12 Tax=Enterobacteriaceae RepID=C1MD90_9ENTR rbh
gluconate transporter
High-affinity gluconate transporter {ECO:0000313|EMBL:KDF07937.1}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter
NECEvent2014_6_7_scaffold_11_27
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29711..31798)
DNA (2088bp) protein (696aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:
malQ; 4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase n=1 Tax=Citrobacter sp. KTE30 RepID=R8UK44_9ENTR rbh
NECEvent2014_6_7_scaffold_11_28
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31808..34201)
DNA (2394bp) protein (798aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Entero
Phosphorylase n=3 Tax=Citrobacter RepID=J0VRZ5_9ENTR rbh
maltose phosphorylase
NECEvent2014_6_7_scaffold_11_29
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34820..37525
DNA (2706bp) protein (902aa)
HTH-type transcriptional regulator MalT n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8R0A4_CITFR rbh
HTH-type transcriptional regulator MalT {ECO:0000256|HAMAP-Rule:MF_01247, ECO:0000256|SAAS:SAAS00010382}; ATP-dependent transcriptional activator MalT {ECO:0000256|HAMAP-Rule:MF_01247}; TaxID=546 spec
transcriptional regulator MalT
NECEvent2014_6_7_scaffold_11_30
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37567..38325)
DNA (759bp) protein (253aa)
Glycerol-3-phosphate regulon repressor n=10 Tax=Enterobacteriaceae RepID=C1MD94_9ENTR rbh
transcriptional regulator
Glycerol-3-phosphate regulon repressor, DeoR family {ECO:0000313|EMBL:CEJ64929.1}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobac
Displaying items 1-30 of 127 in total

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