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NECEvent2014_6_7_scaffold_279_14

Organism: NECEvent2014_6_7_Citrobacter_freundii-rel_52_48_partial

partial RP 20 / 55 MC: 2 BSCG 19 / 51 ASCG 9 / 38 MC: 2
Location: comp(10852..12903)

Top 3 Functional Annotations

Value Algorithm Source
Penicillin-binding protein activator LpoA n=1 Tax=Citrobacter freundii GTC 09629 RepID=R1HL22_CITFR similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 683.0
  • Bit_score: 1336
  • Evalue 0.0
  • rbh
Penicillin-binding protein activator LpoA {ECO:0000256|HAMAP-Rule:MF_01890}; Short=PBP activator LpoA {ECO:0000256|HAMAP-Rule:MF_01890};; Flags: Precursor;; TaxID=1400136 species="Bacteria; Proteobact similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 683.0
  • Bit_score: 1331
  • Evalue 0.0
penicillin-binding protein similarity KEGG
DB: KEGG
  • Identity: 95.5
  • Coverage: 683.0
  • Bit_score: 1276
  • Evalue 0.0

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Taxonomy

Citrobacter freundii → Citrobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2052
ATGGTACCCTCAACATTTTCTCGTTTGAAAGCCGCGCGCGCGCTACCAGTCATTCTGGCAGCACTGATTTTCGCAGGCTGTGGCACCCAGGCGCCAGACCAGAGTGCAGCCCATATGCAGGGCACTGCGCAGGCTGATTCCGGCTTTTATCTGCAACAAATGCAGCAAAGCTCAGATGATAGCAAGACCAACTGGCAATTACTCGCCATTCGTGCACTGCTGAAAGAAGGCAAGAGCCAGCAGGCTAGCGAGCTGTTCAACCAGCTGCCGCAGAAACTAAACGACACTCAGCGTCGTGAGCAGTCTCTGCTGGCCGTCGAGATCAAGCTCGCACAGAAAGATATCGCTGGCGCTCAGGCCCTGCTGGATAAACTCACTCCTGCCGATTTCGATCAAAACCAGCAGGCCAGATACTGGCAGGCGCAAATCGACGTCAACCAGGGTCGCCCATCGTTGACACTACTGCGCGCCCTGATCGCTCAGGAACCGCTGCTGTCCGCGAATGCTAAGCAGAAAAACATCGATGCCACCTGGCAGGCGCTGTCATCCATGACCCAGGAGCAAGCACAGGCACTGGTCATCAATGCGGATGAAAACGTGCTGCAAGGCTGGTTGGATCTCCAGCGCGTCTGGTTCGATAACCGTAACGATCCAGACATGATGAAAGCCGGTATTGCGGACTGGCAGAAACGTTATCCGCAAAACCCGGGCGCAAAAATACTGCCAACGCAGTTGGTTAACGTCCAGAGCTTTAAGCCCGCCTCCACCAGCAAAATTGCGCTGCTGCTGCCGCTGAACGGTCAGGCCGCTGTATTTGGCCGGACTATTCAGCAAGGCTTTGAAGCGGCAAAAAATATGGGTACTGAACCCGTAGCGGCCCCTGCTGTAGCTGCGCCTGCGGTGGATACAACATCTGCGACGACCACAGAACAGCCGCAAACGACTGACGGCGTTGCCAGCCCTTCTCAGGCGTCAGTAAGCGATCTGACCAACGAGACGCCAGCTCAGCCAGAAACACCTGCTGCGCAGCCCACAGCACCCGCTCAGCCAACAACCACCAGCGCACCGGCGAATCCATCAGCAGAGCTGAAAATCTACGACACTTCATCACAGCCTCTGAACCAAATCCTGACTCAGGTTCAACAGGATGGCGCCAGCATCGTGGTTGGCCCACTGCTGAAGAACAATGTTGAAGAGCTGATGAAAAGCAATACGCCATTAAACGTGCTGGCACTTAATCAGCCGGAGTCGGTGAAAAACCTGCCGAACGTCTGCTACTTCGCTTTGTCGCCAGAAGATGAAGCGCGCGACGCCGCGCGTCACATCCGCGATCAAGGAAAACAGACGCCGCTGTTGTTGATCCCTCGGAGTTCATTAGGCGATCGCGTTGCCAACGCCTTTGCACAGGAATGGCAAAAGCTGGGCGGCGGCGTAGTGTTGCAGCAGAAGTTTGGCTCCACCGCCGAGCTGAAAATGGGCGTCAACGGCGGTTCGGGAATTTCCCTGACGGGCAGCCCGGTGGCCTCCTCTGTACCTGCGCAACCTGGCGTGACGATTGGCGGCCTGACGATTCCGGCTGCGCCTACAGATGCGCAGATCACCGGCGGCAGCGGCCGTGTTGATGCCGTGTATATTCTGGCGACGCCGGAAGAAATTGCCTTTATTAAGCCAATGATCGCTATGCGCAACGGCAGCCAGAGCGGCGCAACGCTGTACGCCAGCTCCCGTAGCGCGCAGGGAACTGCTGGCCCGGATTTCCGTCTGGAGATGGAAGGCTTGCAGTACAGCGAAATACCGATGCTGGCAGGTGCTAACGCTCCTCTCATGCAGCAGGCGCTTGGCGCGGTTCGTAACGACTACTCACTGGCACGTATGTATGCGATGGGCGTCGATGCCTGGTCACTTGCCAACCACTTCTCGCAAATGCGTCAGGTACAGGGTTTCGAAATTAACGGCAACACCGGGGCCTTAACCGCAACGCCGGATTGTGTGATTAACAGGAAGTTATCATGGCTCAAATACCAGCAAGGACAAGTCGTCCCCGCCAGTTAA
PROTEIN sequence
Length: 684
MVPSTFSRLKAARALPVILAALIFAGCGTQAPDQSAAHMQGTAQADSGFYLQQMQQSSDDSKTNWQLLAIRALLKEGKSQQASELFNQLPQKLNDTQRREQSLLAVEIKLAQKDIAGAQALLDKLTPADFDQNQQARYWQAQIDVNQGRPSLTLLRALIAQEPLLSANAKQKNIDATWQALSSMTQEQAQALVINADENVLQGWLDLQRVWFDNRNDPDMMKAGIADWQKRYPQNPGAKILPTQLVNVQSFKPASTSKIALLLPLNGQAAVFGRTIQQGFEAAKNMGTEPVAAPAVAAPAVDTTSATTTEQPQTTDGVASPSQASVSDLTNETPAQPETPAAQPTAPAQPTTTSAPANPSAELKIYDTSSQPLNQILTQVQQDGASIVVGPLLKNNVEELMKSNTPLNVLALNQPESVKNLPNVCYFALSPEDEARDAARHIRDQGKQTPLLLIPRSSLGDRVANAFAQEWQKLGGGVVLQQKFGSTAELKMGVNGGSGISLTGSPVASSVPAQPGVTIGGLTIPAAPTDAQITGGSGRVDAVYILATPEEIAFIKPMIAMRNGSQSGATLYASSRSAQGTAGPDFRLEMEGLQYSEIPMLAGANAPLMQQALGAVRNDYSLARMYAMGVDAWSLANHFSQMRQVQGFEINGNTGALTATPDCVINRKLSWLKYQQGQVVPAS*