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NECEvent2014_6_7_scaffold_279

Alias: 176_007_scaffold_279

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_7_scaffold_279_1
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41..1969
DNA (1929bp) protein (643aa)
ATP-dependent RNA helicase DeaD {ECO:0000256|HAMAP-Rule:MF_00964}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00964};; Cold-shock DEAD box protein A {ECO:0000256|HAMAP-Rule:MF_00964}; TaxID=1400136 specie
ATP-dependent RNA helicase DeaD n=2 Tax=Citrobacter RepID=C1M9W5_9ENTR rbh
DEAD/DEAH box helicase
NECEvent2014_6_7_scaffold_279_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2115..3359
DNA (1245bp) protein (415aa)
Tryptophan-specific transporter n=1 Tax=Citrobacter sp. KTE30 RepID=R8UMX6_9ENTR rbh
Tryptophan permease {ECO:0000313|EMBL:KJC04333.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;"
tryptophan permease
NECEvent2014_6_7_scaffold_279_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3447..4454)
DNA (1008bp) protein (336aa)
Luciferase oxidoreductase, group 1 family protein {ECO:0000313|EMBL:KEL78117.1}; EC=1.-.-.- {ECO:0000313|EMBL:KEL78117.1};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Entero
Monooxygenase n=1 Tax=Citrobacter sp. KTE30 RepID=R8UN08_9ENTR rbh
hypothetical protein rbh
NECEvent2014_6_7_scaffold_279_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4631..5509)
DNA (879bp) protein (293aa)
U32 family n=3 Tax=Citrobacter RepID=J1G5V3_9ENTR rbh
FIG139928: Putative protease {ECO:0000313|EMBL:CDL38147.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheric
protease
NECEvent2014_6_7_scaffold_279_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5518..6513)
DNA (996bp) protein (332aa)
Uncharacterized protein n=6 Tax=Citrobacter RepID=C1M9W1_9ENTR rbh
U32 family peptidase {ECO:0000313|EMBL:ETX62422.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii compl
protease
NECEvent2014_6_7_scaffold_279_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6734..7258
DNA (525bp) protein (175aa)
Sterol-binding protein n=6 Tax=Citrobacter RepID=J1G5K4_9ENTR rbh
FIG138517: Putative lipid carrier protein {ECO:0000313|EMBL:CDL38145.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sou
hypothetical protein
NECEvent2014_6_7_scaffold_279_7
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7252..7755
DNA (504bp) protein (168aa)
Abc superfamily transport protein n=6 Tax=Citrobacter RepID=J0M8E2_9ENTR rbh
Putative acetyltransferase YhbS {ECO:0000313|EMBL:GAL45849.1}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter fre
acetyltransferase rbh
NECEvent2014_6_7_scaffold_279_8
Citrobacter youngae, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7742..8056)
DNA (315bp) protein (105aa)
UPF0213 protein WC1_03821 n=1 Tax=Citrobacter sp. KTE30 RepID=R8UN03_9ENTR
UPF0213 protein CIT292_10748 {ECO:0000256|HAMAP-Rule:MF_01029}; TaxID=500640 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter fre
GIY-YIG nuclease superfamily protein
NECEvent2014_6_7_scaffold_279_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8094..8522
DNA (429bp) protein (143aa)
UPF0306 protein WYG_0889 n=3 Tax=Citrobacter RepID=J1G5U8_9ENTR
UPF0306 protein YhbP {ECO:0000256|HAMAP-Rule:MF_00764}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
hypothetical protein
NECEvent2014_6_7_scaffold_279_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8560..9195
DNA (636bp) protein (212aa)
NAD dependent epimerase/dehydratase n=6 Tax=Citrobacter RepID=J0M1N6_9ENTR rbh
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:KEL78124.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherich
hypothetical protein
NECEvent2014_6_7_scaffold_279_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9289..9864)
DNA (576bp) protein (192aa)
Phospholipid-binding domain protein n=8 Tax=Citrobacter RepID=J1G5J9_9ENTR rbh
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:ETX67944.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co
NECEvent2014_6_7_scaffold_279_12
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9874..10464)
DNA (591bp) protein (197aa)
DnaA initiator-associating protein DiaA n=12 Tax=Enterobacteriaceae RepID=C1M9V4_9ENTR rbh
DnaA initiator-associating protein DiaA
DnaA initiator-associating protein DiaA {ECO:0000256|HAMAP-Rule:MF_01157, ECO:0000256|SAAS:SAAS00014432}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enter
NECEvent2014_6_7_scaffold_279_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10499..10894)
DNA (396bp) protein (132aa)
UPF0102 protein WYG_0885 n=5 Tax=Citrobacter RepID=J0VUG1_9ENTR
UPF0102 protein P834_08567 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freu
hypothetical protein
NECEvent2014_6_7_scaffold_279_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10852..12903)
DNA (2052bp) protein (684aa)
Penicillin-binding protein activator LpoA n=1 Tax=Citrobacter freundii GTC 09629 RepID=R1HL22_CITFR rbh
Penicillin-binding protein activator LpoA {ECO:0000256|HAMAP-Rule:MF_01890}; Short=PBP activator LpoA {ECO:0000256|HAMAP-Rule:MF_01890};; Flags: Precursor;; TaxID=1400136 species="Bacteria; Proteobact
penicillin-binding protein
NECEvent2014_6_7_scaffold_279_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12967..13830
DNA (864bp) protein (288aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule
Ribosomal RNA small subunit methyltransferase I n=8 Tax=Citrobacter RepID=C1M9V1_9ENTR rbh
16S rRNA methyltransferase
NECEvent2014_6_7_scaffold_279_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13886..14767)
DNA (882bp) protein (294aa)
D-tagatose-1,6-bisphosphate aldolase subunit KbaY {ECO:0000256|HAMAP-Rule:MF_01293}; Short=TBPA {ECO:0000256|HAMAP-Rule:MF_01293};; Short=TagBP aldolase {ECO:0000256|HAMAP-Rule:MF_01293};; EC=4.1.2.40
D-tagatose-1,6-bisphosphate aldolase subunit KbaY n=2 Tax=Citrobacter freundii RepID=K8QW62_CITFR rbh
kbaY; tagatose-bisphosphate aldolase
NECEvent2014_6_7_scaffold_279_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14780..15934)
DNA (1155bp) protein (385aa)
Tagatose-6-phosphate ketose/aldose isomerase n=3 Tax=Citrobacter RepID=K8QQ19_CITFR rbh
Tagatose-6-phosphate ketose/aldose isomerase {ECO:0000313|EMBL:ETX67938.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Ci
aldose isomerase
NECEvent2014_6_7_scaffold_279_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16236..17369)
DNA (1134bp) protein (378aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1400136 species
N-acetylglucosamine-6-phosphate deacetylase n=2 Tax=Citrobacter freundii RepID=K8QMW3_CITFR rbh
N-acetylglucosamine-6-phosphate deacetylase rbh
NECEvent2014_6_7_scaffold_279_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17366..17800)
DNA (435bp) protein (145aa)
PTS system fructose subfamily IIA component n=6 Tax=Citrobacter RepID=J1G5T9_9ENTR
N-acetylgalactosamine-specific PTS system transporter subunit IIA {ECO:0000313|EMBL:ETX67936.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteria
hypothetical protein
NECEvent2014_6_7_scaffold_279_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17817..18695)
DNA (879bp) protein (293aa)
PTS system, mannose/fructose/sorbose family, IID component n=8 Tax=Citrobacter RepID=C1M9U6_9ENTR rbh
PTS system N-acetylgalactosamine-specific transporter subunit IID {ECO:0000313|EMBL:KJC09509.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae
PTS system N-acetylgalactosamine-specific transporter subunit IID
NECEvent2014_6_7_scaffold_279_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18685..19464)
DNA (780bp) protein (260aa)
Uncharacterized protein n=6 Tax=Citrobacter RepID=C1M9U5_9ENTR rbh
PTS system N-acetylgalactosamine-specific transporter subunit IIC {ECO:0000313|EMBL:KJC09508.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae
PTS system N-acetylgalactosamine-specific transporter subunit IIC
NECEvent2014_6_7_scaffold_279_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19475..19948)
DNA (474bp) protein (158aa)
PTS system, mannose/fructose/sorbose family, IIB component n=8 Tax=Enterobacteriaceae RepID=C1M9U4_9ENTR rbh
N-acetylgalactosamine-specific PTS system transporter subunit IIB {ECO:0000313|EMBL:ETX67933.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteria
PTS system N-acetylgalactosamine-specific transporter subunit IIB
NECEvent2014_6_7_scaffold_279_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19968..21263)
DNA (1296bp) protein (432aa)
D-tagatose-1,6-bisphosphate aldolase subunit KbaZ n=4 Tax=Citrobacter RepID=J0VUF0_9ENTR rbh
D-tagatose-1,6-bisphosphate aldolase subunit KbaZ {ECO:0000256|HAMAP-Rule:MF_01295}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrob
tagatose-bisphosphate aldolase
NECEvent2014_6_7_scaffold_279_24
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21513..22319
DNA (807bp) protein (269aa)
DNA-binding transcriptional regulator AgaR n=7 Tax=Citrobacter RepID=J1G5T4_9ENTR rbh
Putative aga operon transcriptional repressor {ECO:0000313|EMBL:GAL45827.1}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; C
transcriptional regulator
NECEvent2014_6_7_scaffold_279_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22644..23414
DNA (771bp) protein (257aa)
Uncharacterized protein n=7 Tax=Citrobacter RepID=C1M9U1_9ENTR rbh
DeoR-like helix-turn-helix domain protein {ECO:0000313|EMBL:KEL78140.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sou
DeoR family transcriptional regulator
NECEvent2014_6_7_scaffold_279_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23452..24372)
DNA (921bp) protein (307aa)
ROK family protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3D245_CITFR rbh
Glucokinase family protein {ECO:0000313|EMBL:KEL78141.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichi
ROK family protein
NECEvent2014_6_7_scaffold_279_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24391..25647)
DNA (1257bp) protein (419aa)
Oxidoreductase domain-containing protein n=3 Tax=Citrobacter RepID=K8QQ28_CITFR rbh
Oxidoreductase , NAD-binding Rossmann fold family protein {ECO:0000313|EMBL:KEL78142.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Es
oxidoreductase domain-containing protein
NECEvent2014_6_7_scaffold_279_28
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25684..26790)
DNA (1107bp) protein (369aa)
ABC transporter n=3 Tax=Citrobacter RepID=J0VUE4_9ENTR rbh
Uncharacterized protein {ECO:0000313|EMBL:ETX67927.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co
ABC transporter
NECEvent2014_6_7_scaffold_279_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26802..27626)
DNA (825bp) protein (275aa)
Uncharacterized protein n=7 Tax=Citrobacter RepID=C1M9T7_9ENTR rbh
Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:KEL78144.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Ente
binding-protein-dependent transport system inner membrane protein
NECEvent2014_6_7_scaffold_279_30
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27637..28581)
DNA (945bp) protein (315aa)
Binding-protein-dependent transport system inner membrane protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QRL6_CITFR rbh
Sugar ABC transporter permease {ECO:0000313|EMBL:KJC09501.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii
binding-protein-dependent transport system inner membrane protein
Displaying items 1-30 of 38 in total

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