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NECEvent2014_6_7_scaffold_279_20

Organism: NECEvent2014_6_7_Citrobacter_freundii-rel_52_48_partial

partial RP 20 / 55 MC: 2 BSCG 19 / 51 ASCG 9 / 38 MC: 2
Location: comp(17817..18695)

Top 3 Functional Annotations

Value Algorithm Source
PTS system, mannose/fructose/sorbose family, IID component n=8 Tax=Citrobacter RepID=C1M9U6_9ENTR similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 292.0
  • Bit_score: 576
  • Evalue 2.10e-161
  • rbh
PTS system N-acetylgalactosamine-specific transporter subunit IID {ECO:0000313|EMBL:KJC09509.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 292.0
  • Bit_score: 576
  • Evalue 3.00e-161
PTS system N-acetylgalactosamine-specific transporter subunit IID similarity KEGG
DB: KEGG
  • Identity: 99.7
  • Coverage: 292.0
  • Bit_score: 575
  • Evalue 7.90e-162

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Taxonomy

Citrobacter freundii → Citrobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 879
ATGGCATCTAATCAAACGGCTCTGCCGAACGTTTCCGAAACCGAAGAAACGCTGCTGTCCGGCACCAATGAAAACGTCTACGAAGACCAGAATATCGGTGCCGAGCTGACGAAAAAAGATATCAACCGTGTTGCCTGGCGTTCAATGCTGTTGCAGGCCTCTTTTAACTACGAACGTATGCAGGCATCAGGATGGCTGTACGGCCTGTTACCTGCTCTGAAAAAGATCCACACCAATAAGCGCGATCTGGCGCGTTCGATGAAAGGCCATATGGGCTTCTTCAACACGCACCCATTCCTGGTCACGTTTGTTATCGGGATTATCCTGGCGATGGAACGCTCCAAGCAGGATGTGAACAGTATTCAAAGCACCAAGATTGCCGTGGGTGCGCCACTTGGCGGTATCGGTGATGCCATGTTCTGGTTAACGTTACTGCCTATTTGCGGCGGTATCGGGGCCAGCCTGGCGCTGCAAGGCTCTATTCTTGGCGCTGTTGTCTTTATTGTTATGTTCAACGTGGTTCATCTTGGTCTGCGCTTTGGGCTGGCACACTATGCTTATCGAATGGGCGTTGCTGCCATCCCGCTGATTAAAGCTAACACCAAAAAGGTTGGACATGCGGCATCCATCGTTGGGATGACGGTGATCGGCGCGCTGGTAGCGACCTATGTTCGCCTGAGCACTACGCTGGAAATCACTGCTGGCGATGCAGTAGTGAAACTGCAAACAGATGTGATAGACAAGCTGATGCCTGCTTTTTTACCGCTGGTCTACACATTAACCATGTTCTGGCTGGTCCGCCGTGGCTGGAGTCCTCTGCGCCTTATCGCCATTACCGTGGTGCTCGGCGTCGTAGGTAAGTTCTGTCACTTCCTGTAA
PROTEIN sequence
Length: 293
MASNQTALPNVSETEETLLSGTNENVYEDQNIGAELTKKDINRVAWRSMLLQASFNYERMQASGWLYGLLPALKKIHTNKRDLARSMKGHMGFFNTHPFLVTFVIGIILAMERSKQDVNSIQSTKIAVGAPLGGIGDAMFWLTLLPICGGIGASLALQGSILGAVVFIVMFNVVHLGLRFGLAHYAYRMGVAAIPLIKANTKKVGHAASIVGMTVIGALVATYVRLSTTLEITAGDAVVKLQTDVIDKLMPAFLPLVYTLTMFWLVRRGWSPLRLIAITVVLGVVGKFCHFL*