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NECEvent2014_6_7_scaffold_252_7

Organism: NECEvent2014_6_7_Citrobacter_freundii-rel_52_48_partial

partial RP 20 / 55 MC: 2 BSCG 19 / 51 ASCG 9 / 38 MC: 2
Location: comp(4852..5529)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding transcriptional activator n=1 Tax=Citrobacter sp. KTE30 RepID=R8V7B2_9ENTR similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 225.0
  • Bit_score: 428
  • Evalue 3.30e-117
  • rbh
DNA-binding transcriptional activator {ECO:0000313|EMBL:ETX72035.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobact similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 225.0
  • Bit_score: 428
  • Evalue 4.60e-117
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 89.9
  • Coverage: 208.0
  • Bit_score: 363
  • Evalue 3.60e-98

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Taxonomy

Citrobacter freundii → Citrobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 678
ATGGAAAGCAGAATCATCAAAAGAAACGTTGCACTGGTAGAAAAGTGTACAATGAGCAGTGTAGGTATTAATAGTTTATTTAATACCATGCCAGATGACCAATATAAACTTCATCTCTTTTCTAGCCAGCCCACTTTTAGTCAGGCAATGTTAAAGATGTCGTTTTCGGCAGTTATTTTTTCTCTCTCTGCAATCAGAAGCGATCGCAGAGCTGGGTTGGCCTATTTAACGGAACTGGCGATAAATTTTCCACGGATTCGCCGTGTGGTGATTGCCTATGATGACGCTGAAGCGCGTTTAATTGGCTCCTTGTCCCCCTTGCCGCTGGATGGCGTTGTGAGTAAAGCTTCTTCGTTAACGGTGCTACAGGACGCTTTATTTACGGCGTTAAGCAGCCCAAGCCGAGGCACCGAAAGCACGAAAAACCATTGGTATATTAATCAAAGCCGCATGCTCAGTCCGACAGAACGAGAAATACTGCGCTTTATGTCAAATGGCTATTCGATGCCGCAGATTGCCGCTCAGCTTGAACGGAACATTAAAACCATTCGGGCACACAAATTTAATGTGATGTCCAAACTGGGAGTAAGCTCAGATGCCGGGTTACTGGATGCTGCCGATATCCTGCTGTACCTGCGAGCTGGCGAGCCAGCGCCTTTTATGCAGGCGGCTTCGTGA
PROTEIN sequence
Length: 226
MESRIIKRNVALVEKCTMSSVGINSLFNTMPDDQYKLHLFSSQPTFSQAMLKMSFSAVIFSLSAIRSDRRAGLAYLTELAINFPRIRRVVIAYDDAEARLIGSLSPLPLDGVVSKASSLTVLQDALFTALSSPSRGTESTKNHWYINQSRMLSPTEREILRFMSNGYSMPQIAAQLERNIKTIRAHKFNVMSKLGVSSDAGLLDAADILLYLRAGEPAPFMQAAS*