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NECEvent2014_6_7_scaffold_252

Alias: 176_007_scaffold_252

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_7_scaffold_252_trna_1
unknown

Not on your lists

5..87
DNA (83bp)
transferRNA
NECEvent2014_6_7_scaffold_252_1
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(131..367)
DNA (237bp) protein (79aa)
Putative uncharacterized protein n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SEF1_CITFR
Uncharacterized protein {ECO:0000313|EMBL:ETX72041.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co
hypothetical protein
NECEvent2014_6_7_scaffold_252_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

623..1699
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii GTC 09629 RepID=R1HWT9_CITFR rbh
Diguanylate cyclase {ECO:0000313|EMBL:ETX72040.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii comple
diguanylate cyclase
NECEvent2014_6_7_scaffold_252_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1808..2596
DNA (789bp) protein (263aa)
Siderophore-iron reductase FhuF {ECO:0000313|EMBL:KEL78783.1}; EC=1.-.-.- {ECO:0000313|EMBL:KEL78783.1};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enter
Ferric iron reductase involved in ferric hydroximate transport n=3 Tax=Citrobacter RepID=K8QSK4_CITFR rbh
iron reductase
NECEvent2014_6_7_scaffold_252_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2626..3969)
DNA (1344bp) protein (448aa)
PTS system lactose/cellobiose family IIC subunit n=3 Tax=Citrobacter RepID=J0LYT8_9ENTR rbh
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii c
cytochrome C biogenesis protein CcmF
NECEvent2014_6_7_scaffold_252_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3959..4099)
DNA (141bp) protein (47aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=J1G2Y1_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX72037.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co
NECEvent2014_6_7_scaffold_252_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4336..4794
DNA (459bp) protein (153aa)
YbaK/EbsC protein n=6 Tax=Citrobacter RepID=J0VRI5_9ENTR
tRNA proofreading protein STM4549 {ECO:0000313|EMBL:CDL36385.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esc
prolyl-tRNA synthetase
NECEvent2014_6_7_scaffold_252_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4852..5529)
DNA (678bp) protein (226aa)
DNA-binding transcriptional activator n=1 Tax=Citrobacter sp. KTE30 RepID=R8V7B2_9ENTR rbh
DNA-binding transcriptional activator {ECO:0000313|EMBL:ETX72035.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobact
transcriptional regulator
NECEvent2014_6_7_scaffold_252_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5490..6215)
DNA (726bp) protein (242aa)
Transcriptional regulator n=3 Tax=Citrobacter RepID=J1G2S4_9ENTR rbh
Transcriptional regulator {ECO:0000313|EMBL:KJC13595.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii comp
transcriptional regulator
NECEvent2014_6_7_scaffold_252_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6678..7454
DNA (777bp) protein (259aa)
Inner membrane protein yjjP n=6 Tax=Citrobacter RepID=J0LYU1_9ENTR rbh
Membrane protein {ECO:0000313|EMBL:KJC13596.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" so
hypothetical protein
NECEvent2014_6_7_scaffold_252_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7445..7918
DNA (474bp) protein (158aa)
UPF0442 protein WYG_2228 n=6 Tax=Citrobacter RepID=J1G2Y4_9ENTR rbh
UPF0442 protein TN42_01190 {ECO:0000256|HAMAP-Rule:MF_01191}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii
hypothetical protein
NECEvent2014_6_7_scaffold_252_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8042..8581
DNA (540bp) protein (180aa)
Primosomal protein 1 n=6 Tax=Citrobacter RepID=J0VRJ0_9ENTR rbh
Primosomal protein 1 {ECO:0000256|HAMAP-Rule:MF_01061}; Primosomal protein I {ECO:0000256|HAMAP-Rule:MF_01061}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
primosomal protein DnaI
NECEvent2014_6_7_scaffold_252_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8584..9321
DNA (738bp) protein (246aa)
DNA replication protein dnaC n=8 Tax=Citrobacter RepID=C1MC71_9ENTR rbh
DNA replication protein DnaC {ECO:0000313|EMBL:KJC13599.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii c
DNA replication protein DnaC
NECEvent2014_6_7_scaffold_252_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9392..9883
DNA (492bp) protein (164aa)
Primosomal operon k protein (Mdob-dnac intergenic region) n=7 Tax=Citrobacter RepID=J1G2S8_9ENTR rbh
Uncharacterized protein {ECO:0000313|EMBL:ETX72029.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co
endopeptidase
NECEvent2014_6_7_scaffold_252_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10115..12406
DNA (2292bp) protein (764aa)
Phosphoglycerol transferase I {ECO:0000256|HAMAP-Rule:MF_01070}; EC=2.7.8.20 {ECO:0000256|HAMAP-Rule:MF_01070};; Phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase {ECO:0000256|H
phosphoglycerol transferase I (EC:2.7.8.20)
Phosphoglycerol transferase I n=3 Tax=Citrobacter RepID=R1HGP5_CITFR rbh
NECEvent2014_6_7_scaffold_252_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12449..13894)
DNA (1446bp) protein (482aa)
Altronate oxidoreductase {ECO:0000313|EMBL:KJC13602.1}; EC=1.1.1.58 {ECO:0000313|EMBL:KJC13602.1};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriac
altronate oxidoreductase (EC:1.1.1.58)
Altronate oxidoreductase n=2 Tax=Citrobacter RepID=J0VRJ4_9ENTR rbh
NECEvent2014_6_7_scaffold_252_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13908..14930)
DNA (1023bp) protein (341aa)
Chlorophyll synthesis pathway protein BchC n=3 Tax=Citrobacter RepID=R8V2V1_9ENTR rbh
Chlorophyll synthesis pathway protein BchC {ECO:0000313|EMBL:ETX72026.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citr
galactonate oxidoreductase
NECEvent2014_6_7_scaffold_252_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15067..15981
DNA (915bp) protein (305aa)
YjjM protein n=5 Tax=Citrobacter RepID=J1G2T3_9ENTR rbh
Uncharacterized protein {ECO:0000313|EMBL:KDF09667.1}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co
GntR family transcriptional regulator
NECEvent2014_6_7_scaffold_252_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16195..17556
DNA (1362bp) protein (454aa)
L-galactonate transporter n=3 Tax=Citrobacter RepID=C1MC65_9ENTR rbh
L-galactonate transporter {ECO:0000313|EMBL:KJC13605.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii comp
L-galactonate transporter
NECEvent2014_6_7_scaffold_252_19
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17609..18124
DNA (516bp) protein (172aa)
Gnat family n=3 Tax=Citrobacter RepID=J1G2Z2_9ENTR rbh
Acetyltransferase family protein {ECO:0000313|EMBL:EIQ50245.1}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella
GCN5 family acetyltransferase
NECEvent2014_6_7_scaffold_252_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18210..19871)
DNA (1662bp) protein (554aa)
Methyl-accepting chemotaxis protein I n=3 Tax=Citrobacter RepID=J0VRJ8_9ENTR rbh
Methyl-accepting chemotaxis protein I {ECO:0000313|EMBL:ETX72022.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobact
chemotaxis protein
NECEvent2014_6_7_scaffold_252_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20237..22387
DNA (2151bp) protein (717aa)
Carbon starvation protein n=3 Tax=Citrobacter RepID=J0M5B2_9ENTR rbh
Inner membrane protein YjiY {ECO:0000313|EMBL:ETX72021.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundi
carbon starvation protein A
NECEvent2014_6_7_scaffold_252_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22498..22692
DNA (195bp) protein (65aa)
Uncharacterized protein n=9 Tax=Enterobacteriaceae RepID=C1MC61_9ENTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETX72020.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co
NECEvent2014_6_7_scaffold_252_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22705..23661
DNA (957bp) protein (319aa)
p47k family protein n=3 Tax=Citrobacter RepID=J0LYV4_9ENTR rbh
GTP-binding protein {ECO:0000313|EMBL:ETX72019.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii comple
GTP-binding protein
NECEvent2014_6_7_scaffold_252_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23712..24776)
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE30 RepID=R8V2N7_9ENTR rbh
Uncharacterized protein {ECO:0000313|EMBL:KEL78806.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
1,4-alpha-glucan branching protein
NECEvent2014_6_7_scaffold_252_25
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24766..25833)
DNA (1068bp) protein (356aa)
Secretion protein HlyD family protein n=3 Tax=Citrobacter RepID=J1G2U4_9ENTR rbh
Secretion protein HlyD {ECO:0000313|EMBL:ETX72017.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii com
hemolysin secretion protein D rbh
NECEvent2014_6_7_scaffold_252_26
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25840..26304)
DNA (465bp) protein (155aa)
Transcriptional regulator n=5 Tax=Citrobacter RepID=J0LYV8_9ENTR rbh
MarR family transcriptional regulator {ECO:0000313|EMBL:ETX72016.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobact
MarR family transcriptional regulator
NECEvent2014_6_7_scaffold_252_27
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26452..26616)
DNA (165bp) protein (55aa)
Cytoplasmic protein n=7 Tax=Citrobacter RepID=J1G2Z9_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX72015.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co
hypothetical protein
NECEvent2014_6_7_scaffold_252_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26794..28206
DNA (1413bp) protein (471aa)
Transcriptional regulator, GntR family domain / Aspartate aminotransferase {ECO:0000313|EMBL:CDL36352.1}; EC=2.6.1.1 {ECO:0000313|EMBL:CDL36352.1};; TaxID=1432557 species="Bacteria; Proteobacteria; Ga
Transcriptional family classes i and ii n=3 Tax=Citrobacter RepID=J0VRK9_9ENTR rbh
GntR family transcriptional regulator
NECEvent2014_6_7_scaffold_252_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28258..29220)
DNA (963bp) protein (321aa)
Uncharacterized protein n=5 Tax=Citrobacter RepID=R1FTQ2_CITFR rbh
Transposase {ECO:0000313|EMBL:CDL36351.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
hypothetical protein
Displaying items 1-30 of 39 in total

View Taxonomy