ggKbase home page

NECEvent2014_6_7_scaffold_558_12

Organism: NECEvent2014_6_7_Citrobacter_freundii-rel_52_48_partial

partial RP 20 / 55 MC: 2 BSCG 19 / 51 ASCG 9 / 38 MC: 2
Location: 11157..11645

Top 3 Functional Annotations

Value Algorithm Source
Regulator of sigma D n=6 Tax=Citrobacter RepID=J1FYN0_9ENTR similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 162.0
  • Bit_score: 327
  • Evalue 7.40e-87
  • rbh
Regulator of sigma D {ECO:0000256|HAMAP-Rule:MF_01181, ECO:0000256|SAAS:SAAS00010112}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobac similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 162.0
  • Bit_score: 327
  • Evalue 1.00e-86
anti-RNA polymerase sigma 70 factor similarity KEGG
DB: KEGG
  • Identity: 90.1
  • Coverage: 162.0
  • Bit_score: 297
  • Evalue 3.00e-78

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Citrobacter freundii → Citrobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 489
ATGCTAAACCAGCTGGAAAGCCTGACGGAGCACGTCGGAGGAAGTAATAAACTGGTTGATCGCTGGCTACATGTACGTAAGCACCTGCTCGTGGCTTACTACAATCTGGTTGGCATTAAGCCTGGCAAAGAATCGTACATGCGACTCAATGAAAAGGCGCTGGATGATTTTTGTCAGAGCCTGGTCGATTACCTCTCCACCGGACACTTCAGTATTTATGAACGTATTCTCCATAAATTGGAAGGGAACGGGCAGCTTTTAAAAGCCACAAAAATTTGGCCGCTGCTGGAAGCTAATACGCAGCTGATCATGGACTACTATGACTCCAGCCTGGAAACTGCGATTGATCATGATAACTTCCTTGAGTTTCAAAAGGTTTTATCGGATCTCGGCGAAGCGCTGGAAGCCCGGTTCGTGCTCGAAGATAAGCTGATCATGCTGGTATTTGATGCGATGCACGAGAGTGGCACTCTCAAACGTCCTGCTTGA
PROTEIN sequence
Length: 163
MLNQLESLTEHVGGSNKLVDRWLHVRKHLLVAYYNLVGIKPGKESYMRLNEKALDDFCQSLVDYLSTGHFSIYERILHKLEGNGQLLKATKIWPLLEANTQLIMDYYDSSLETAIDHDNFLEFQKVLSDLGEALEARFVLEDKLIMLVFDAMHESGTLKRPA*