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NECEvent2014_6_7_scaffold_558

Alias: 176_007_scaffold_558

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_7_scaffold_558_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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318..1907
DNA (1590bp) protein (530aa)
purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:3.5.4.10)
Bifunctional purine biosynthesis protein PurH n=1 Tax=Citrobacter sp. KTE30 RepID=R8UHS5_9ENTR rbh
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
NECEvent2014_6_7_scaffold_558_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1923..3212
DNA (1290bp) protein (430aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {EC
Phosphoribosylamine--glycine ligase n=5 Tax=Citrobacter RepID=J1FYM0_9ENTR rbh
Phosphoribosylamine--glycine ligase
NECEvent2014_6_7_scaffold_558_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3209..4534)
DNA (1326bp) protein (442aa)
Transcriptional regulatory protein ZraR n=3 Tax=Citrobacter RepID=J0VM43_9ENTR rbh
Transcriptional regulator {ECO:0000313|EMBL:KJC04467.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii comp
transcriptional regulator
NECEvent2014_6_7_scaffold_558_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4540..5925)
DNA (1386bp) protein (462aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriac
Sensor protein ZraS n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QVI1_CITFR rbh
sensor protein ZraS
NECEvent2014_6_7_scaffold_558_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6190..6633
DNA (444bp) protein (148aa)
Zinc resistance protein n=2 Tax=Citrobacter freundii RepID=K8QME2_CITFR
Zinc resistance-associated protein {ECO:0000313|EMBL:KEL80160.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Es
zraP; zinc resistance protein
NECEvent2014_6_7_scaffold_558_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6695..7387)
DNA (693bp) protein (231aa)
Dna-binding protein hu-alpha n=2 Tax=Citrobacter RepID=K8ZBL0_9ENTR rbh
Uncharacterized protein {ECO:0000313|EMBL:ETX66960.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co
membrane protein
NECEvent2014_6_7_scaffold_558_7
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7399..7671)
DNA (273bp) protein (91aa)
DNA-binding protein HU-alpha n=586 Tax=Enterobacteriaceae RepID=DBHA_SALTI
transcriptional regulator HU subunit alpha
DNA-binding protein HU-alpha {ECO:0000313|EMBL:ACH51095.1}; TaxID=454166 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella
NECEvent2014_6_7_scaffold_558_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7858..8448)
DNA (591bp) protein (197aa)
Uncharacterized protein n=6 Tax=Enterobacteriaceae RepID=I6G6H7_SHIFL rbh
Uncharacterized protein {ECO:0000313|EMBL:KJC04472.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii comple
hypothetical protein
NECEvent2014_6_7_scaffold_558_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8482..9162)
DNA (681bp) protein (227aa)
Endonuclease V {ECO:0000256|HAMAP-Rule:MF_00801}; EC=3.1.21.7 {ECO:0000256|HAMAP-Rule:MF_00801};; Deoxyinosine 3'endonuclease {ECO:0000256|HAMAP-Rule:MF_00801}; Deoxyribonuclease V {ECO:0000256|HAMAP-
endonuclease V (EC:3.1.21.7)
Endonuclease V n=5 Tax=Citrobacter RepID=J0M0R7_9ENTR rbh
NECEvent2014_6_7_scaffold_558_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9172..10236)
DNA (1065bp) protein (355aa)
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase n=2 Tax=Citrobacter freundii RepID=G9SB64_CITFR rbh
NECEvent2014_6_7_scaffold_558_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10287..11060)
DNA (774bp) protein (258aa)
NADH pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00297, ECO:0000256|SAAS:SAAS00016168}; EC=3.6.1.22 {ECO:0000256|HAMAP-Rule:MF_00297, ECO:0000256|SAAS:SAAS00016202};; TaxID=1400137 species="Bacteria; P
NADH pyrophosphatase n=8 Tax=Citrobacter RepID=C1MGA9_9ENTR rbh
nudC; NADH pyrophosphatase
NECEvent2014_6_7_scaffold_558_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11157..11645
DNA (489bp) protein (163aa)
Regulator of sigma D n=6 Tax=Citrobacter RepID=J1FYN0_9ENTR rbh
Regulator of sigma D {ECO:0000256|HAMAP-Rule:MF_01181, ECO:0000256|SAAS:SAAS00010112}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobac
anti-RNA polymerase sigma 70 factor
NECEvent2014_6_7_scaffold_558_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12005..13903
DNA (1899bp) protein (633aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidi
Phosphomethylpyrimidine synthase n=2 Tax=Citrobacter freundii RepID=K8QIE9_CITFR rbh
thiamine biosynthesis protein ThiC
NECEvent2014_6_7_scaffold_558_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13903..14538
DNA (636bp) protein (212aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5
thiE; thiamine-phosphate pyrophosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase n=3 Tax=Citrobacter RepID=J0M0S2_9ENTR rbh
NECEvent2014_6_7_scaffold_558_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14531..15289
DNA (759bp) protein (253aa)
Sulfur carrier protein ThiS adenylyltransferase n=2 Tax=Citrobacter RepID=K8QMF2_CITFR rbh
Sulfur carrier protein adenylyltransferase ThiF {ECO:0000313|EMBL:CDL40877.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.
thiamine biosynthesis protein ThiF
NECEvent2014_6_7_scaffold_558_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15472..16242
DNA (771bp) protein (257aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobact
Thiazole synthase n=3 Tax=Citrobacter RepID=K8QKZ4_CITFR rbh
thiG; thiazole synthase
NECEvent2014_6_7_scaffold_558_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16239..17372
DNA (1134bp) protein (378aa)
Thiamine biosynthesis protein ThiH n=3 Tax=Citrobacter RepID=J0VM57_9ENTR rbh
2-iminoacetate synthase {ECO:0000313|EMBL:ETX66948.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co
thiH; thiamine biosynthesis protein ThiH
NECEvent2014_6_7_scaffold_558_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17492..17704)
DNA (213bp) protein (71aa)
Cold shock-like protein CspB n=8 Tax=Citrobacter RepID=C1MGB6_9ENTR
Cold shock-like protein CspB {ECO:0000313|EMBL:ETX66947.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freund
cspA3; major cold shock protein
NECEvent2014_6_7_scaffold_558_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18796..19101
DNA (306bp) protein (102aa)
Phosphotransferase system n=5 Tax=Citrobacter RepID=J1FYH1_9ENTR
PTS cellobiose transporter subunit IIB {ECO:0000313|EMBL:KJC00690.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter
hypothetical protein
NECEvent2014_6_7_scaffold_558_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19106..19423
DNA (318bp) protein (106aa)
PTS system, diacetylchitobiose-specific IIA component {ECO:0000313|EMBL:CDL39971.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CDL39971.1};; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; E
Phosphotransferase system pts n=6 Tax=Citrobacter RepID=J0LUJ7_9ENTR
PTS lactose transporter subunit IIA
NECEvent2014_6_7_scaffold_558_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19535..20467)
DNA (933bp) protein (311aa)
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase
DNA-directed RNA polymerase subunit beta' n=2 Tax=Citrobacter RepID=C1MGB9_9ENTR
Displaying 21 items

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