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NECEvent2014_6_7_scaffold_558_21

Organism: NECEvent2014_6_7_Citrobacter_freundii-rel_52_48_partial

partial RP 20 / 55 MC: 2 BSCG 19 / 51 ASCG 9 / 38 MC: 2
Location: comp(19535..20467)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 310.0
  • Bit_score: 601
  • Evalue 1.10e-169
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 310.0
  • Bit_score: 601
  • Evalue 5.40e-169
DNA-directed RNA polymerase subunit beta' n=2 Tax=Citrobacter RepID=C1MGB9_9ENTR similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 310.0
  • Bit_score: 601
  • Evalue 3.90e-169

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 933
CAGTACTTCCTGCCGGGTAAAGCGATTGTTCAGCTGGAAGATGGCGTACAGATCAGTTCTGGTGACACCCTGGCGCGTGTTCCGCAGGAATCCGGCGGTACCAAGGATATCACCGGTGGTCTGCCGCGCGTTGCTGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCATTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGATGGTAGCGAACCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGTAGAACGTGGTGACGTTGTTTCCGACGGTCCGGAAGCGCCGCACGACATCCTGCGTCTGCGTGGTGTGCATGCTGTAACTCGTTACATCGTTAACGAAGTTCAGGACGTATACCGTCTGCAGGGTGTTAAGATTAACGATAAACACATCGAAGTTATCGTTCGTCAGATGCTGCGTAAAGCCACCATCGAAAGCGCTGGTAGCTCCGACTTCCTGGAAGGCGAGCAGGTTGAATACTCCCGCGTCAAGATCGCTAACCGCGAGCTGGAAGCGAACGGCAAAGTGGGTGCAACGTTCTCCCGCGATCTGCTGGGTATCACCAAAGCGTCTCTGGCAACCGAGTCCTTCATCTCTGCAGCATCGTTCCAGGAAACCACGCGTGTCCTGACCGAAGCCGCTGTTGCAGGTAAACGTGATGAACTGCGCGGTCTGAAAGAGAACGTAATCGTGGGTCGTCTGATCCCGGCAGGTACCGGTTACGCGTACCACCAGGATCGTATGCGCCGTCGCGCAGCGGGCGAACTGCCAGCTGCACCGCAGGTGACTGCTGAAGATGCGTCTGCCAGCCTGGCAGAACTGCTGAACGCAGGCCTGGGCGGTTCTGACAACGATTAA
PROTEIN sequence
Length: 311
QYFLPGKAIVQLEDGVQISSGDTLARVPQESGGTKDITGGLPRVADLFEARRPKEPAILAEISGIISFGKETKGKRRLVITPVDGSEPYEEMIPKWRQLNVFEGERVERGDVVSDGPEAPHDILRLRGVHAVTRYIVNEVQDVYRLQGVKINDKHIEVIVRQMLRKATIESAGSSDFLEGEQVEYSRVKIANRELEANGKVGATFSRDLLGITKASLATESFISAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGYAYHQDRMRRRAAGELPAAPQVTAEDASASLAELLNAGLGGSDND*