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NECEvent2014_6_7_scaffold_558_18

Organism: NECEvent2014_6_7_Citrobacter_freundii-rel_52_48_partial

partial RP 20 / 55 MC: 2 BSCG 19 / 51 ASCG 9 / 38 MC: 2
Location: comp(17492..17704)

Top 3 Functional Annotations

Value Algorithm Source
Cold shock-like protein CspB n=8 Tax=Citrobacter RepID=C1MGB6_9ENTR similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 70.0
  • Bit_score: 144
  • Evalue 3.00e-32
Cold shock-like protein CspB {ECO:0000313|EMBL:ETX66947.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freund similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 70.0
  • Bit_score: 144
  • Evalue 4.10e-32
cspA3; major cold shock protein similarity KEGG
DB: KEGG
  • Identity: 95.7
  • Coverage: 70.0
  • Bit_score: 141
  • Evalue 1.20e-31

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Taxonomy

Citrobacter freundii → Citrobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 213
ATGTCTAACAAAATGACTGGTTTAGTAAAATGGTTTAACTCTGATAAAGGCTTCGGCTTTATCACTCCTCAGGACGGTAGCAAGGATGTGTTTGTGCATTTTTCCGCTATCCAGAGTAACGATTTTAAAACGTTAGACGAAGGTCAAAAGGTGGAGTTCTCCGTGGAGAATGGCGCTAAAGGCCCGTCTGCTGTTAACGTTGTCGCGCTGTAA
PROTEIN sequence
Length: 71
MSNKMTGLVKWFNSDKGFGFITPQDGSKDVFVHFSAIQSNDFKTLDEGQKVEFSVENGAKGPSAVNVVAL*