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NECEvent2014_6_7_scaffold_669_4

Organism: NECEvent2014_6_7_Citrobacter_freundii-rel_52_48_partial

partial RP 20 / 55 MC: 2 BSCG 19 / 51 ASCG 9 / 38 MC: 2
Location: 3533..4861

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent RNA helicase SrmB {ECO:0000256|HAMAP-Rule:MF_00967}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00967};; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriale similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 442.0
  • Bit_score: 873
  • Evalue 1.80e-250
ATP-dependent RNA helicase SrmB n=5 Tax=Enterobacteriaceae RepID=I6HGN7_SHIFL similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 442.0
  • Bit_score: 873
  • Evalue 1.30e-250
  • rbh
ATP-dependent RNA helicase SrmB similarity KEGG
DB: KEGG
  • Identity: 98.6
  • Coverage: 442.0
  • Bit_score: 861
  • Evalue 8.30e-248

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Taxonomy

Shigella flexneri → Shigella → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1329
ATGACTGTAACGACTTTTTCCGAACTTGAACTCGATGAAAGCCTTCTGGATGCCCTCCAGGAAAAAGGTTTCACTCGCCCGACCGCCATTCAGGCTGCCGCCATTCCGCCTGCGCTCGATGGCCGTGATGTACTCGGTTCTGCGCCGACAGGCACCGGTAAAACGGCGGCATATTTGCTGCCAGCGTTGCAGCACCTGCTCGACTTCCCACGCAAGAAATCTGGTCCGCCGCGCATTTTAATCCTGACGCCAACGCGCGAACTGGCGATGCAGGTTGCTGAACACGCCCGTGAGCTGGCGAAAAATACGCATCTGGATATCGCGACCATTACCGGCGGCGTGGCTTACATGAACCACATGGAAGTCTTTAGCGAAAACCAGGACATCGTGGTTGCCACCACGGGTCGTCTGCTGCAATACATTAAAGAAGAAAACTTCGACTGCCATGCGGTTGAGACGCTAATTCTCGATGAAGCAGACCGTATGCTGGATATGGGTTTTGCCCAGGACATCGAACATATCGCCGGTGAAACCCGCTGGCGTAAGCAAACCATGCTGTTCTCCGCCACGCTGGAAGGCGATGCGATTAAAGATTTTGCCGAGCGTCTGTTGGAAGATCCGGTAGAAGTCTCAGCGGATCCGTCCACCCGCGAACGCAAGAAGATCCATCAGTTTTACTACCGTGCCGATGACATCGAGCACAAAACTGCCCTGCTGATCCATCTGTTAAAACAGCCGGAAGCGACCCGCTCGATTGTCTTCGTACGTAAACGCGAGCGTGTGCACGAGCTGGCAGGCTGGCTGCGCCAGGCGGGCATTAACAACTGCTATCTCGAAGGCGAGATGGTGCAGAACAAACGCAATGAAGCGATCAAACGCCTGACCGATGGCCGCGTGAACGTGCTGGTAGCCACCGACGTTGCCGCTCGCGGGATCGATATTCCTGACGTCAGCCATGTGTTTAACTTCGACATGCCGCGCAGTGGCGATGCCTATCTGCACCGCATTGGCCGTACCGGTCGCGCAGGTCGTAAAGGTACTGCGATCTCTTTGGTTGAAGCGCACGACCATCTACTTCTCGGCAAAGCGAGCCGCTATATTGACGAACCGCTGAAAGCACGCGTCATCGACGAACTGCGTCCAACCACGCGCGCGCCAAGTGAGAAATCCAACGGTAAACCATCCAAGAAAGTGCTGGCGAAGCGCGCCGAGAAAAAAGCGAAAGAGAAAGAGAAGCCGCGGGTGAAAAAACGTCACCGCGATGCAAAAAATATCGGCAAACGTCGTAAGCCGAGCGGAGCTGCTACCCAGCAGTCCGACAAAGAGTAA
PROTEIN sequence
Length: 443
MTVTTFSELELDESLLDALQEKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLLPALQHLLDFPRKKSGPPRILILTPTRELAMQVAEHARELAKNTHLDIATITGGVAYMNHMEVFSENQDIVVATTGRLLQYIKEENFDCHAVETLILDEADRMLDMGFAQDIEHIAGETRWRKQTMLFSATLEGDAIKDFAERLLEDPVEVSADPSTRERKKIHQFYYRADDIEHKTALLIHLLKQPEATRSIVFVRKRERVHELAGWLRQAGINNCYLEGEMVQNKRNEAIKRLTDGRVNVLVATDVAARGIDIPDVSHVFNFDMPRSGDAYLHRIGRTGRAGRKGTAISLVEAHDHLLLGKASRYIDEPLKARVIDELRPTTRAPSEKSNGKPSKKVLAKRAEKKAKEKEKPRVKKRHRDAKNIGKRRKPSGAATQQSDKE*