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NECEvent2014_6_7_scaffold_669

Alias: 176_007_scaffold_669

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_7_scaffold_669_1
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(58..633)
DNA (576bp) protein (192aa)
RNA polymerase sigma factor n=12 Tax=Citrobacter RepID=D4B6I4_9ENTR rbh
RNA polymerase sigma factor RpoE
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freun
NECEvent2014_6_7_scaffold_669_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1058..2680
DNA (1623bp) protein (541aa)
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriace
L-aspartate oxidase (EC:1.4.3.16)
L-aspartate oxidase n=7 Tax=Citrobacter RepID=C1M8I7_9ENTR rbh
NECEvent2014_6_7_scaffold_669_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2665..3402)
DNA (738bp) protein (246aa)
tRNA1(Val) (adenine(37)-N6)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01872, ECO:0000256|SAAS:SAAS00016413}; EC=2.1.1.223 {ECO:0000256|HAMAP-Rule:MF_01872, ECO:0000256|SAAS:SAAS00016405};; tRNA m6A
tRNA1(Val) (adenine(37)-N6)-methyltransferase n=3 Tax=Citrobacter RepID=J0MAV3_9ENTR rbh
tRNA (adenine-N6)-methyltransferase
NECEvent2014_6_7_scaffold_669_4
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3533..4861
DNA (1329bp) protein (443aa)
ATP-dependent RNA helicase SrmB {ECO:0000256|HAMAP-Rule:MF_00967}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00967};; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriale
ATP-dependent RNA helicase SrmB n=5 Tax=Enterobacteriaceae RepID=I6HGN7_SHIFL rbh
ATP-dependent RNA helicase SrmB
NECEvent2014_6_7_scaffold_669_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4879..5820)
DNA (942bp) protein (314aa)
LysR family transcriptional regulator n=3 Tax=Citrobacter RepID=J1G847_9ENTR rbh
Transcriptional regulator {ECO:0000313|EMBL:ETX69910.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii
LysR family transcriptional regulator
NECEvent2014_6_7_scaffold_669_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5878..6465
DNA (588bp) protein (196aa)
Cysteine/O-acetylserine exporter n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3B9Q5_CITFR rbh
Cysteine/O-acetylserine efflux protein {ECO:0000313|EMBL:ETX69911.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobac
amino acid transporter rbh
NECEvent2014_6_7_scaffold_669_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6545..6928)
DNA (384bp) protein (128aa)
Autonomous glycyl radical cofactor n=9 Tax=Citrobacter RepID=C1M8J2_9ENTR
Autonomous glycyl radical cofactor {ECO:0000256|HAMAP-Rule:MF_00806, ECO:0000256|SAAS:SAAS00028662}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobact
autonomous glycyl radical cofactor GrcA
NECEvent2014_6_7_scaffold_669_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7246..7935
DNA (690bp) protein (230aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBas
uracil-DNA glycosylase (EC:3.2.2.-)
Uracil-DNA glycosylase n=5 Tax=Citrobacter RepID=J0MAV0_9ENTR rbh
NECEvent2014_6_7_scaffold_669_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7969..9048)
DNA (1080bp) protein (360aa)
Rna methyltransferase n=5 Tax=Citrobacter RepID=J0VWQ7_9ENTR rbh
Methyltransferase {ECO:0000313|EMBL:KJC04233.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" s
methyltransferase
NECEvent2014_6_7_scaffold_669_10
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9256..9675
DNA (420bp) protein (140aa)
Thioredoxin 2 {ECO:0000313|EMBL:CEJ66853.1}; EC=1.8.1.8 {ECO:0000313|EMBL:CEJ66853.1};; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Cit
Thioredoxin n=10 Tax=Enterobacteriaceae RepID=D4B6H2_9ENTR
thioredoxin 2
NECEvent2014_6_7_scaffold_669_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9745..10443
DNA (699bp) protein (233aa)
Dtw domain protein n=3 Tax=Citrobacter RepID=J0M427_9ENTR rbh
DTW domain-containing protein YfiP {ECO:0000313|EMBL:KJC07022.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freu
hypothetical protein
NECEvent2014_6_7_scaffold_669_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10480..13140
DNA (2661bp) protein (887aa)
Binding domain acetyltransferase domain protein n=4 Tax=Citrobacter RepID=J1G7U3_9ENTR rbh
Protein acetyltransferase {ECO:0000313|EMBL:CDL41280.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
protein acetyltransferase
NECEvent2014_6_7_scaffold_669_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13255..14610
DNA (1356bp) protein (452aa)
CDP-diacylglycerol--serine O-phosphatidyltransferase {ECO:0000256|PIRNR:PIRNR000850}; EC=2.7.8.8 {ECO:0000256|PIRNR:PIRNR000850};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Ent
pssA; phosphatidylserine synthase (EC:2.7.8.8)
Phosphatidylserine synthase n=5 Tax=Citrobacter RepID=K8R2B7_CITFR rbh
NECEvent2014_6_7_scaffold_669_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14655..14978
DNA (324bp) protein (108aa)
Lipoprotein n=3 Tax=Citrobacter RepID=R8UUU2_9ENTR
Putative outer membrane lipoprotein {ECO:0000313|EMBL:CDL41284.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="E
lipoprotein
NECEvent2014_6_7_scaffold_669_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14975..16273)
DNA (1299bp) protein (433aa)
Alpha-ketoglutarate transporter n=3 Tax=Citrobacter RepID=J1G839_9ENTR rbh
Alpha-ketoglutarate transporter {ECO:0000313|EMBL:KJC04238.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundi
alpha-ketoglutarate transporter
Displaying 15 items

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