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NECEvent2014_6_7_scaffold_643_6

Organism: NECEvent2014_6_7_Citrobacter_freundii-rel_52_48_partial

partial RP 20 / 55 MC: 2 BSCG 19 / 51 ASCG 9 / 38 MC: 2
Location: comp(3904..4386)

Top 3 Functional Annotations

Value Algorithm Source
Hcp1 family type VI secretion system effector n=3 Tax=Citrobacter RepID=J0M7U3_9ENTR similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 160.0
  • Bit_score: 340
  • Evalue 8.30e-91
  • rbh
Hcp family T6SS protein CtsH1 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 160.0
  • Bit_score: 340
  • Evalue 2.30e-91
Hcp family T6SS protein CtsH1 {ECO:0000313|EMBL:AHY12258.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freun similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 160.0
  • Bit_score: 340
  • Evalue 1.20e-90

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Taxonomy

Citrobacter freundii → Citrobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 483
ATGGCGATTCCAGGCAATATGTGGATTTATGACGATGGTGGCGCGCTGATTAAGGGCGGGTGTGACGTAAAGGGAAGAGAATACAGTATTGAATTTAAAGGTTTTCATCACAATCTCTCTATTCCAACTGATAATGCAACGGGTAAACCAACAGGCACACGCCAACATTCACCGATGATGATCGTCAAAGAGTTTGACTACTCGAGTCCCTATTTATACAAAGCGGTCGCTTCTGGTCAGAATCTTAAGTCTGCAGAGATTCGTTGGTACAAAATCAATGATGCCGGTCAGGAAGTGGAGTATTTCAACATGCTGCTCGAGGGCGTGCGGATTGTCTCGGTCTCTCCGACGATGGCTGGGCCAGAAGACAAAAACAACAATCACCTTGAAACCATAGAGTTACGCTACGAAAAAATCACATGGAAGCATTGCGACGGGAACATTATCTATACCGACGCATGGAATGACCGGCAGACGGCATAA
PROTEIN sequence
Length: 161
MAIPGNMWIYDDGGALIKGGCDVKGREYSIEFKGFHHNLSIPTDNATGKPTGTRQHSPMMIVKEFDYSSPYLYKAVASGQNLKSAEIRWYKINDAGQEVEYFNMLLEGVRIVSVSPTMAGPEDKNNNHLETIELRYEKITWKHCDGNIIYTDAWNDRQTA*