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NECEvent2014_6_7_scaffold_643

Alias: 176_007_scaffold_643

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_7_scaffold_643_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1210
DNA (1209bp) protein (403aa)
Cytochrome o ubiquinol oxidase, subunit I {ECO:0000313|EMBL:KEL80463.1}; EC=1.10.3.- {ECO:0000313|EMBL:KEL80463.1};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteri
Cytochrome o ubiquinol oxidase subunit I n=5 Tax=Citrobacter RepID=J0M7T9_9ENTR
cytochrome o ubiquinol oxidase subunit I
NECEvent2014_6_7_scaffold_643_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1200..1814
DNA (615bp) protein (205aa)
Cytochrome o ubiquinol oxidase, subunit III n=5 Tax=Enterobacteriaceae RepID=I6H9C2_SHIFL rbh
cytochrome o ubiquinol oxidase subunit III
Cytochrome o ubiquinol oxidase subunit 3 {ECO:0000313|EMBL:KDF20804.1}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrob
NECEvent2014_6_7_scaffold_643_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1814..2143
DNA (330bp) protein (110aa)
Cytochrome o ubiquinol oxidase subunit IV n=7 Tax=Enterobacteriaceae RepID=I6H9C1_SHIFL
Cytochrome o ubiquinol oxidase CyoD {ECO:0000313|EMBL:ETX72511.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter
cytochrome o ubiquinol oxidase subunit IV
NECEvent2014_6_7_scaffold_643_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2155..3045
DNA (891bp) protein (297aa)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:00
Protoheme IX farnesyltransferase n=6 Tax=Citrobacter RepID=J1G5B8_9ENTR rbh
protoheme IX farnesyltransferase
NECEvent2014_6_7_scaffold_643_5
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3102..3425)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Shigella flexneri 1235-66 RepID=I6H9B9_SHIFL
Uncharacterized protein {ECO:0000313|EMBL:EIQ77361.1}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri
hypothetical protein
NECEvent2014_6_7_scaffold_643_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3904..4386)
DNA (483bp) protein (161aa)
Hcp1 family type VI secretion system effector n=3 Tax=Citrobacter RepID=J0M7U3_9ENTR rbh
Hcp family T6SS protein CtsH1
Hcp family T6SS protein CtsH1 {ECO:0000313|EMBL:AHY12258.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freun
NECEvent2014_6_7_scaffold_643_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4569..5933
DNA (1365bp) protein (455aa)
Inner membrane transporter yajR n=1 Tax=Citrobacter sp. KTE30 RepID=R8UYD6_9ENTR rbh
Putative transport protein {ECO:0000313|EMBL:CDL37554.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichi
membrane protein
NECEvent2014_6_7_scaffold_643_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6014..6505)
DNA (492bp) protein (164aa)
UPF0234 protein CIT292_08405 n=8 Tax=Enterobacteriaceae RepID=D4BD38_9ENTR rbh
UPF0234 protein TN42_02970 {ECO:0000256|HAMAP-Rule:MF_00632}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii
nucleotide-binding protein
NECEvent2014_6_7_scaffold_643_9
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6680..7591
DNA (912bp) protein (304aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; E
2-dehydropantoate 2-reductase (EC:1.1.1.169) rbh
2-dehydropantoate 2-reductase n=6 Tax=Citrobacter RepID=J1G5C2_9ENTR rbh
NECEvent2014_6_7_scaffold_643_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7554..8144
DNA (591bp) protein (197aa)
4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis protein n=3 Tax=Citrobacter RepID=J0VTW8_9ENTR rbh
Chaperone YajL {ECO:0000313|EMBL:ETX72504.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;"
oxidative-stress-resistance chaperone
NECEvent2014_6_7_scaffold_643_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8177..9259
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE30 RepID=R8UY41_9ENTR rbh
Uncharacterized protein {ECO:0000313|EMBL:ETX72503.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co
hypothetical protein
NECEvent2014_6_7_scaffold_643_12
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9325..10773)
DNA (1449bp) protein (483aa)
tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00022963}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094270};; Sulfur carrier protein ThiS sulfu
tRNA sulfurtransferase n=3 Tax=Citrobacter RepID=J1G518_9ENTR rbh
tRNA s(4)U8 sulfurtransferase
NECEvent2014_6_7_scaffold_643_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10970..11212
DNA (243bp) protein (81aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclea
exodeoxyribonuclease VII small subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 small subunit n=8 Tax=Citrobacter RepID=C1M833_9ENTR
NECEvent2014_6_7_scaffold_643_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11213..12112
DNA (900bp) protein (300aa)
Geranyltranstransferase n=6 Tax=Citrobacter RepID=J1G5C6_9ENTR rbh
Geranyl transferase {ECO:0000313|EMBL:KJC13159.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;"
geranyl transferase
NECEvent2014_6_7_scaffold_643_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12137..13999
DNA (1863bp) protein (621aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=3 Tax=Citrobacter RepID=J0VTX2_9ENTR rbh
NECEvent2014_6_7_scaffold_643_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14056..15030
DNA (975bp) protein (325aa)
Aldoketo-oxidoreductase n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QZU6_CITFR rbh
Oxidoreductase {ECO:0000313|EMBL:KJC13157.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" sour
oxidoreductase
NECEvent2014_6_7_scaffold_643_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15100..15618)
DNA (519bp) protein (173aa)
Phosphatidylglycerophosphatase A {ECO:0000256|PIRNR:PIRNR006162}; EC=3.1.3.27 {ECO:0000256|PIRNR:PIRNR006162};; Phosphatidylglycerolphosphate phosphatase A {ECO:0000256|PIRNR:PIRNR006162}; TaxID=14001
phosphatidylglycerophosphatase (EC:3.1.3.27)
Phosphatidylglycerophosphatase A n=7 Tax=Citrobacter RepID=C1M7P3_9ENTR rbh
NECEvent2014_6_7_scaffold_643_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15596..16573)
DNA (978bp) protein (326aa)
Thiamine-monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128}; Short=TMP kinase {ECO:0000256|HAMAP-Rule:MF_02128};; Short=Thiamine-phosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128};; EC=2.7.4.16 {E
thiamine monophosphate kinase (EC:2.7.4.16)
Thiamine-monophosphate kinase n=3 Tax=Citrobacter RepID=K8QY51_CITFR rbh
NECEvent2014_6_7_scaffold_643_19
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16651..17070)
DNA (420bp) protein (140aa)
N utilization substance protein B homolog n=584 Tax=Enterobacteriaceae RepID=NUSB_CITK8
nusB; transcription antitermination protein NusB
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=1124962 species="Bacteria; Prot
NECEvent2014_6_7_scaffold_643_20
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17090..17560)
DNA (471bp) protein (157aa)
6,7-dimethyl-8-ribityllumazine synthase n=14 Tax=Enterobacteriaceae RepID=C1M7P0_9ENTR
ribH; 6,7-dimethyl-8-ribityllumazine synthase
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00
Displaying 20 items

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