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NECEvent2014_6_7_scaffold_393_1

Organism: NECEvent2014_6_7_Clostridium-rel_29_71_hint

partial RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: comp(1..243)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TWY8_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 62.0
  • Bit_score: 70
  • Evalue 1.10e-09
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EKQ51552.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium s similarity UNIPROT
DB: UniProtKB
  • Identity: 50.0
  • Coverage: 62.0
  • Bit_score: 70
  • Evalue 1.50e-09
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 46.8
  • Coverage: 62.0
  • Bit_score: 66
  • Evalue 5.60e-09

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Taxonomy

Clostridium sp. Maddingley MBC34-26 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 243
ATGCCCAAAAATGTGATATATGCAACAATTGCATATATAATAAAAGAGGTGATGTTTATGGATTATAAGTATATTGAAACTTTAGTGAAGCTTGCAAAGGAAAAAGATATTGAAGCACAAGAAATTCTTGTTGAAGAATTCAAACCAATAATATATGGGCTTACTAAAAAGGTATTTGCTCCTGGATATGAAAGGGAGGATCTTATTAGTGAATCCTATAGAATCCTTTTTAACTGCATAGCT
PROTEIN sequence
Length: 81
MPKNVIYATIAYIIKEVMFMDYKYIETLVKLAKEKDIEAQEILVEEFKPIIYGLTKKVFAPGYEREDLISESYRILFNCIA