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NECEvent2014_6_7_scaffold_864_8

Organism: NECEvent2014_6_7_Firmicute_plasmid_like_46_100

RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: comp(6638..7063)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70, region 4 n=35 Tax=root RepID=V6W360_STRPY similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 141.0
  • Bit_score: 284
  • Evalue 8.20e-74
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 141.0
  • Bit_score: 284
  • Evalue 2.30e-74
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EDM61982.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena D similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 141.0
  • Bit_score: 284
  • Evalue 1.10e-73

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Taxonomy

Dorea longicatena → Dorea → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 426
ATGGCATACAACCACGGACGGGAGGACAGGAAATGGCGTATCTGGAAAGAAGCGGAGGAAAAGCTGCTGCGTGAGTGCGGCGTTGATGAAGCGACCATTGAGCAGATACGCATGGCGGACAGGGCAGACTTCAATTCCAACAGGCGGTTTTACCGATGGACGAATGACGTTGCGGAATATCTTGAGGACATGGCAGGCAGGGAGCGGCAGGCGGAAGTGGGTACGGTTGCGGAGTTACTGGAAGAGATTGAGAGCGAAAATCTCTATCAAGTATTAGTCACGGTGGACGGGCGTACCTTGAAAATCGTCCTGCTGAAAATGCAGGGGTATTCCACAAAGGAGATTGCCCCGCTTGTGCATTTGACGACTGGTGCCATCTATGCGAGGTTAGACCATCTGCGGAAGAAGCTGCGGAAAATTTTATAG
PROTEIN sequence
Length: 142
MAYNHGREDRKWRIWKEAEEKLLRECGVDEATIEQIRMADRADFNSNRRFYRWTNDVAEYLEDMAGRERQAEVGTVAELLEEIESENLYQVLVTVDGRTLKIVLLKMQGYSTKEIAPLVHLTTGAIYARLDHLRKKLRKIL*