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NECEvent2014_6_7_scaffold_864

Alias: 176_007_scaffold_864

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_7_scaffold_864_1
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(97..1953)
DNA (1857bp) protein (619aa)
Site-specific recombinases, DNA invertase Pin homologs n=24 Tax=root RepID=D4L0X6_9FIRM rbh
Site-specific recombinases, DNA invertase Pin homologs
TnpX site-specific recombinase {ECO:0000313|EMBL:EEX20396.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
NECEvent2014_6_7_scaffold_864_2
Streptococcus agalactiae, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2008..2271)
DNA (264bp) protein (88aa)
Uncharacterized protein n=35 Tax=root RepID=A5ZNP1_9FIRM
hypothetical protein
Stage II sporulation protein R {ECO:0000313|EMBL:ESV55826.1}; TaxID=1154860 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus agalactiae
NECEvent2014_6_7_scaffold_864_3
Streptococcus agalactiae, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2271..2501)
DNA (231bp) protein (77aa)
Uncharacterized protein conserved in bacteria n=31 Tax=root RepID=D4L0X4_9FIRM
hypothetical protein
Seryl-tRNA synthetase {ECO:0000313|EMBL:ESV55827.1}; TaxID=1154860 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus agalactiae LMG 1474
NECEvent2014_6_7_scaffold_864_4
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2547..3401)
DNA (855bp) protein (285aa)
ParB-like partition proteins n=26 Tax=root RepID=D4L0X3_9FIRM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETD26067.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.
NECEvent2014_6_7_scaffold_864_5
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3410..4375)
DNA (966bp) protein (322aa)
Plasmid recombination enzyme n=29 Tax=root RepID=D4L0X2_9FIRM rbh
hypothetical protein
Plasmid recombination enzyme {ECO:0000313|EMBL:EDM88490.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
NECEvent2014_6_7_scaffold_864_6
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4900..5925)
DNA (1026bp) protein (342aa)
Uncharacterized protein n=23 Tax=root RepID=A7VZ31_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:ETD26065.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.
hypothetical protein
NECEvent2014_6_7_scaffold_864_7
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6231..6686
DNA (456bp) protein (152aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=R3E2J1_ENTFL rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDR99462.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15
NECEvent2014_6_7_scaffold_864_8
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6638..7063)
DNA (426bp) protein (142aa)
Sigma-70, region 4 n=35 Tax=root RepID=V6W360_STRPY
hypothetical protein
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EDM61982.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena D
NECEvent2014_6_7_scaffold_864_9
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7158..7670)
DNA (513bp) protein (171aa)
Sigma-70 region 4 domain protein n=36 Tax=Bacteria RepID=D9SLI1_CLOC7 rbh
DNA-directed RNA polymerase specialized sigma subunit
Uncharacterized protein {ECO:0000313|EMBL:ETD26062.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.
NECEvent2014_6_7_scaffold_864_10
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8158..8331)
DNA (174bp) protein (58aa)
Cpp2 n=19 Tax=root RepID=E6RWW3_CAMJS
cpp2
Uncharacterized protein {ECO:0000313|EMBL:EFV16580.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
NECEvent2014_6_7_scaffold_864_11
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8383..10302)
DNA (1920bp) protein (640aa)
Tetracycline resistance protein n=25 Tax=Bacteria RepID=F0YZ45_9CLOT rbh
tetracycline resistance protein Tet
Tetracycline resistance protein tetO {ECO:0000313|EMBL:ETD26061.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactar
NECEvent2014_6_7_scaffold_864_12
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10669..11043)
DNA (375bp) protein (125aa)
Uncharacterized protein n=45 Tax=root RepID=D6ZFX3_MOBCV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDR97109.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
Displaying 12 items

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