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NECEvent2014_6_7_scaffold_17

Alias: 176_007_scaffold_17

Search features with annotation key words

Displaying items 1-30 of 132 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_7_scaffold_17_1
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

2..1234
DNA (1233bp) protein (411aa)
6-phospho-beta-glucosidase (EC:3.2.1.86)
6-phospho-beta-glucosidase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G7R5_9FIRM
6-phospho-beta-glucosidase {ECO:0000313|EMBL:EFW05836.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus
NECEvent2014_6_7_scaffold_17_2
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1523..2077
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H1Y7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96978.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
accessory gene regulator B
NECEvent2014_6_7_scaffold_17_3
unknown

Not on your lists

2100..2225
DNA (126bp) protein (42aa)

This feature has no annotations

NECEvent2014_6_7_scaffold_17_4
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2247..2603
DNA (357bp) protein (119aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s
Sensor histidine kinase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BYJ0_9CLOT
NECEvent2014_6_7_scaffold_17_5
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2649..3506
DNA (858bp) protein (286aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q605_9CLOT
two-component sensor histidine kinase
NECEvent2014_6_7_scaffold_17_6
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3727..4989
DNA (1263bp) protein (421aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q605_9CLOT rbh
sensor histidine kinase
NECEvent2014_6_7_scaffold_17_7
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5274..5846
DNA (573bp) protein (191aa)
RNA polymerase factor sigma-70 (EC:2.7.7.6)
RNA polymerase sigma-70 factor, ECF subfamily n=2 Tax=Bacillus RepID=C3AK16_BACMY
Uncharacterized protein {ECO:0000313|EMBL:KEZ88457.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
NECEvent2014_6_7_scaffold_17_8
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5839..7128
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CB83_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR26567.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
NECEvent2014_6_7_scaffold_17_9
Catonella morbi, Catonella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7413..7805
DNA (393bp) protein (131aa)
Sigma-70 region 2 n=1 Tax=Catonella morbi ATCC 51271 RepID=V2Y7F3_9FIRM
Sigma-70 region 2 {ECO:0000313|EMBL:ESL03586.1}; TaxID=592026 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Catonella.;" source="Catonella morbi ATCC 51271.;"
RNA polymerase sigma factor, sigma-70 family
NECEvent2014_6_7_scaffold_17_10
unknown

Not on your lists

7825..8988
DNA (1164bp) protein (388aa)

This feature has no annotations

NECEvent2014_6_7_scaffold_17_11
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9030..9878)
DNA (849bp) protein (283aa)
LD-carboxypeptidase family protein {ECO:0000313|EMBL:ACD24527.1}; Muramoyltetrapeptide carboxypeptidase {ECO:0000313|EMBL:CDH91414.1}; EC=3.4.17.13 {ECO:0000313|EMBL:CDH91414.1};; TaxID=935198 species
LD-carboxypeptidase family protein n=2 Tax=Clostridium botulinum B RepID=B2TN89_CLOBB
LD-carboxypeptidase family protein
NECEvent2014_6_7_scaffold_17_12
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10011..11777
DNA (1767bp) protein (589aa)
Xaa-Pro aminopeptidase 1 (EC:3.4.11.9)
Putative Xaa-Pro aminopeptidase 1 n=1 Tax=Clostridium chauvoei JF4335 RepID=S6ENM7_9CLOT
Putative Xaa-Pro aminopeptidase 1 {ECO:0000313|EMBL:CDG02782.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4
NECEvent2014_6_7_scaffold_17_13

Not on your lists

11962..13095
DNA (1134bp) protein (378aa)
Membrane protein n=1 Tax=uncultured organism RepID=M1P0K2_9ZZZZ
Membrane protein {ECO:0000313|EMBL:AGF92881.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
hypothetical protein
NECEvent2014_6_7_scaffold_17_14
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13088..13591
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TW65_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ57020.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp.
hypothetical protein
NECEvent2014_6_7_scaffold_17_15
unknown

Not on your lists

13686..13871
DNA (186bp) protein (62aa)

This feature has no annotations

NECEvent2014_6_7_scaffold_17_16
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14023..14709)
DNA (687bp) protein (229aa)
GntR family transcriptional regulator n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G2K9_CLOPA
GntR family transcriptional regulator {ECO:0000313|EMBL:ETD70665.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteuri
GntR family transcriptional regulator
NECEvent2014_6_7_scaffold_17_17
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14840..16237
DNA (1398bp) protein (466aa)
aryl-phospho-beta-glucosidase (EC:3.2.1.86)
Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6T9E6_9CLOT
6-phospho-beta-glucosidase {ECO:0000313|EMBL:KJU72699.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
NECEvent2014_6_7_scaffold_17_18
unknown

Not on your lists

16453..16788
DNA (336bp) protein (112aa)

This feature has no annotations

NECEvent2014_6_7_scaffold_17_19
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16790..17053)
DNA (264bp) protein (88aa)
Putative Phosphoesterase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F0C8_9CLOT
Putative Phosphoesterase {ECO:0000313|EMBL:CDG02021.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
hypothetical protein
NECEvent2014_6_7_scaffold_17_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17570..18028
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Clostridium sp. JC122 RepID=UPI000287FB2B
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:ABG86537.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain S
NECEvent2014_6_7_scaffold_17_21
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18308..18694
DNA (387bp) protein (129aa)
Transcriptional regulator, GntR family n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QCM0_9CLOT
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EKY25425.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum
transcriptional regulator, GntR family
NECEvent2014_6_7_scaffold_17_22
Fervidicella metallireducens, Fervidicella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18706..20091
DNA (1386bp) protein (462aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F1H5_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EYE87314.1}; TaxID=1403537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Fervidicella.;" source="Fervidicella metallireducens AeB.
hypothetical protein
NECEvent2014_6_7_scaffold_17_23
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20230..20844
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GFW0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJU70438.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
hypothetical protein
NECEvent2014_6_7_scaffold_17_24
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20942..21730)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6FRA6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB14580.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
hypothetical protein
NECEvent2014_6_7_scaffold_17_25
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21938..22135
DNA (198bp) protein (66aa)
Helix-turn-helix domain-containing protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PUU0_9CLOT
Transcriptional regulator, XRE family {ECO:0000313|EMBL:EET87019.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidi
transcriptional regulator, XRE family
NECEvent2014_6_7_scaffold_17_26
unknown

Not on your lists

22147..22557
DNA (411bp) protein (137aa)

This feature has no annotations

NECEvent2014_6_7_scaffold_17_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22666..23793
DNA (1128bp) protein (376aa)
Thermophilic metalloprotease family protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RMW8_CLOPF
Metalloprotease {ECO:0000313|EMBL:EIA18126.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
metalloprotease
NECEvent2014_6_7_scaffold_17_28
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23925..24584
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9Y215_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY82711.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.
NECEvent2014_6_7_scaffold_17_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24903..25892
DNA (990bp) protein (330aa)
Enzyme involved in biofilm formation {ECO:0000313|EMBL:CDS89235.1}; EC=1.-.-.- {ECO:0000313|EMBL:CDS89235.1};; Oxidoreductase {ECO:0000313|EMBL:CKH89362.1}; EC=1.1.1.292 {ECO:0000313|EMBL:CKH89362.1};
Oxidoreductase , NAD-binding Rossmann fold family protein n=174 Tax=Clostridium difficile RepID=T3G9C5_CLODC rbh
NAD(P)-binding oxidoreductase
NECEvent2014_6_7_scaffold_17_30
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25929..26996)
DNA (1068bp) protein (356aa)
2-nitropropane dioxygenase (EC:1.13.12.16)
2-nitropropane dioxygenase-like enzyme n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U3H1_9CLOT
2-nitropropane dioxygenase-like enzyme {ECO:0000313|EMBL:EKQ55067.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="
Displaying items 1-30 of 132 in total

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