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NECEvent2014_6_7_scaffold_84

Alias: 176_007_scaffold_84

Search features with annotation key words

Displaying items 1-30 of 87 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_7_scaffold_84_1
Haemophilus paraphrohaemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..256
DNA (255bp) protein (85aa)
ABC transporter, substrate-binding protein, family 3 n=1 Tax=Haemophilus paraphrohaemolyticus HK411 RepID=I2NFR3_9PAST
ABC transporter, substrate-binding protein, family 3 {ECO:0000313|EMBL:EIG24674.1}; TaxID=1095743 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;
ABC transporter
NECEvent2014_6_7_scaffold_84_2
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(359..1141)
DNA (783bp) protein (261aa)
Delta-lactam-biosynthetic de-N-acetylase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3F5_9CLOT
pdaA; delta-lactam-biosynthetic de-N-acetylase
Delta-lactam-biosynthetic de-N-acetylase {ECO:0000313|EMBL:AIY85013.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium barat
NECEvent2014_6_7_scaffold_84_3
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1351..1587
DNA (237bp) protein (79aa)
PadR family transcriptional regulator n=1 Tax=Clostridium intestinale URNW RepID=U2PYL4_9CLOT
PadR family transcriptional regulator {ECO:0000313|EMBL:ERK28884.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestin
PadR family transcriptional regulator
NECEvent2014_6_7_scaffold_84_4
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1577..1801
DNA (225bp) protein (75aa)
Putative uncharacterized protein n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SKS0_CLOC7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL53492.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain A
NECEvent2014_6_7_scaffold_84_5
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1949..2911
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Clostridium intestinale URNW RepID=U2NIB3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI99467.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
hypothetical protein DUF2812
NECEvent2014_6_7_scaffold_84_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3192..4289
DNA (1098bp) protein (366aa)
Ribosome-binding ATPase YchF n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SRV8_CLOPS
ychF; GTP-dependent nucleic acid-binding protein EngD
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (s
NECEvent2014_6_7_scaffold_84_7
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4488..4916
DNA (429bp) protein (143aa)
Protein MraZ n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EL01_9CLOT
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
cell division protein MraZ
NECEvent2014_6_7_scaffold_84_8
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4929..5861
DNA (933bp) protein (311aa)
rsmH; 16S rRNA methyltransferase (EC:2.1.1.199)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007, ECO:0000313|EMBL:AIY82582.1};; 16S rRNA m(4)C1402 methyltransferase {E
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MVN7_CLOSA
NECEvent2014_6_7_scaffold_84_9
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5896..6393
DNA (498bp) protein (166aa)
Cell division protein FtsL n=1 Tax=Clostridium intestinale URNW RepID=U2PWW4_9CLOT
cell division FtsL family protein
Uncharacterized protein {ECO:0000313|EMBL:KJU71303.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
NECEvent2014_6_7_scaffold_84_10
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6436..8676
DNA (2241bp) protein (747aa)
Stage V sporulation protein D n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V4V8_CLOBA
stage V sporulation protein D
Stage V sporulation protein D {ECO:0000313|EMBL:AIY82573.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sul
NECEvent2014_6_7_scaffold_84_11
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8717..10174
DNA (1458bp) protein (486aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5URY1_CLOBO
murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
NECEvent2014_6_7_scaffold_84_12
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10267..11631
DNA (1365bp) protein (455aa)
murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase family protein (EC:6.3.2.10)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136, ECO:0000313|EMBL:AIY82960.1};; TaxID=1415775 species="Bacteria;
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Clostridium colicanis 209318 RepID=N9Y275_9CLOT rbh
NECEvent2014_6_7_scaffold_84_13
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11668..12642
DNA (975bp) protein (325aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5URY3_CLOBO
NECEvent2014_6_7_scaffold_84_14
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12668..13789
DNA (1122bp) protein (374aa)
Stage V sporulation protein E n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HDV8_9CLOT
ftsW; cell division protein FtsW
Cell division protein FtsW {ECO:0000313|EMBL:AIY83260.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sulliv
NECEvent2014_6_7_scaffold_84_15
unknown

Not on your lists

14019..14111
DNA (93bp) protein (31aa)

This feature has no annotations

NECEvent2014_6_7_scaffold_84_16
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14056..14802
DNA (747bp) protein (249aa)
Polypeptide-transport-associated domain protein, FtsQ-type n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LTS8_CLOB8
Peptidase S49 {ECO:0000313|EMBL:KIL06678.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
POTRA domain, FtsQ-type family protein
NECEvent2014_6_7_scaffold_84_17
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14814..15542
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FA16_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY83263.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.
NECEvent2014_6_7_scaffold_84_18
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15556..15906
DNA (351bp) protein (117aa)
Small basic protein n=4 Tax=Clostridium botulinum RepID=B2TS21_CLOBB
hypothetical protein
Small basic protein {ECO:0000313|EMBL:KJU71310.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
NECEvent2014_6_7_scaffold_84_19
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15907..16635
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TAH4_9CLOT
Division initiation protein {ECO:0000313|EMBL:KJU71311.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
hypothetical protein
NECEvent2014_6_7_scaffold_84_20
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16727..17401
DNA (675bp) protein (225aa)
Alanine racemase domain protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LTT2_CLOB8
alanine racemase domain-containing protein
Alanine racemase domain protein {ECO:0000313|EMBL:ABR33762.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (s
NECEvent2014_6_7_scaffold_84_21
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17402..17860
DNA (459bp) protein (153aa)
Cell division protein SepF n=2 Tax=Clostridium botulinum E RepID=B2V4U8_CLOBA
Cell division protein SepF {ECO:0000256|HAMAP-Rule:MF_01197}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.
hypothetical protein
NECEvent2014_6_7_scaffold_84_22
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17870..18130
DNA (261bp) protein (87aa)
Yggt family protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V4U7_CLOBA
Uncharacterized protein {ECO:0000313|EMBL:KJU71314.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
YGGT family protein
NECEvent2014_6_7_scaffold_84_23
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18133..18900
DNA (768bp) protein (256aa)
S4 domain protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V4U6_CLOBA
S4 domain-containing protein
RNA-binding protein S4 {ECO:0000313|EMBL:KIL06671.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
NECEvent2014_6_7_scaffold_84_24
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18916..19521
DNA (606bp) protein (202aa)
DivIVA domain-containing protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XQG4_9CLOT rbh
DivIVA domain protein
DivIVA domain protein {ECO:0000313|EMBL:AIY83534.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
NECEvent2014_6_7_scaffold_84_25
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19635..20552
DNA (918bp) protein (306aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridiu
Pseudouridine synthase n=2 Tax=Clostridium butyricum RepID=M8K6V2_CLOBU
pseudouridine synthase, RluA family protein
NECEvent2014_6_7_scaffold_84_26
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20565..21101
DNA (537bp) protein (179aa)
pyrR; bifunctional protein pyrR (EC:2.4.2.9)
Bifunctional protein PyrR n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CBS0_9CLOT
Bifunctional protein PyrR {ECO:0000256|HAMAP-Rule:MF_01219}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU
NECEvent2014_6_7_scaffold_84_27
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21114..22283
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WFT8_9CLOT rbh
THUMP domain protein
THUMP domain protein {ECO:0000313|EMBL:AIY82955.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
NECEvent2014_6_7_scaffold_84_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22317..24059)
DNA (1743bp) protein (581aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AQC5_CLOBU
Fibronectin-binding protein {ECO:0000313|EMBL:ETI87806.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;
yloA; protein YloA
NECEvent2014_6_7_scaffold_84_29
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24307..25311
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6UBD7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ56879.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp.
hypothetical protein
NECEvent2014_6_7_scaffold_84_30
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25351..26763
DNA (1413bp) protein (471aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HFU7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97660.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
pulE; type II secretion system protein E
Displaying items 1-30 of 87 in total

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