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NECEvent2014_6_7_scaffold_203

Alias: 176_007_scaffold_203

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_7_scaffold_203_1
unknown

Not on your lists

comp(88..609)
DNA (522bp) protein (174aa)

This feature has no annotations

NECEvent2014_6_7_scaffold_203_2
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

698..1378
DNA (681bp) protein (227aa)
sdaAB; L-serine dehydratase, iron-sulfur-dependent, beta subunit (EC:4.3.1.17)
L-serine dehydratase, iron-sulfur-dependent, beta subunit n=1 Tax=Clostridium colicanis 209318 RepID=N9Y474_9CLOT rbh
L-serine dehydratase, iron-sulfur-dependent, beta subunit {ECO:0000313|EMBL:ENZ02617.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="C
NECEvent2014_6_7_scaffold_203_3
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1378..2259
DNA (882bp) protein (294aa)
sdaAA; L-serine dehydratase, alpha chain (EC:4.3.1.17)
L-serine dehydratase, iron-sulfur-dependent, alpha subunit n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QJR7_9CLOT rbh
L-serine dehydratase, iron-sulfur-dependent, alpha subunit {ECO:0000313|EMBL:EKY28191.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="
NECEvent2014_6_7_scaffold_203_4
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2642..3145
DNA (504bp) protein (168aa)
Putative ThiW protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6ETJ5_9CLOT
Putative ThiW protein {ECO:0000313|EMBL:CDG02550.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
thiW; thiamine-precursor transport protein ThiW
NECEvent2014_6_7_scaffold_203_5
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3195..4955
DNA (1761bp) protein (587aa)
recQ; ATP-dependent DNA helicase RecQ (EC:3.6.4.12)
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:AIY84515.1}; EC=3.6.4.12 {ECO:0000313|EMBL:AIY84515.1};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clost
ATP-dependent DNA helicase RecQ n=1 Tax=Clostridium colicanis 209318 RepID=N9XSE4_9CLOT rbh
NECEvent2014_6_7_scaffold_203_6
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5089..5295)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HG22_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97803.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
small acid-soluble spore protein, alpha/beta type
NECEvent2014_6_7_scaffold_203_7
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5596..7524
DNA (1929bp) protein (643aa)
Putative Non-specific serine/threonine protein kinase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FP89_9CLOT
Putative Non-specific serine/threonine protein kinase {ECO:0000313|EMBL:CDG02544.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clos
prkA AAA domain protein
NECEvent2014_6_7_scaffold_203_8
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7525..8697
DNA (1173bp) protein (391aa)
UPF0229 protein CCH01_018370 n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FBW1_9CLOT
UPF0229 protein CCH01_018370 {ECO:0000256|HAMAP-Rule:MF_01232}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF43
yhbH; sporulation protein YhbH
NECEvent2014_6_7_scaffold_203_9
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8700..10082
DNA (1383bp) protein (461aa)
Stage V sporulation protein R n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BUE1_9CLOT
Stage V sporulation protein R {ECO:0000313|EMBL:EOR20300.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU
stage V sporulation protein R
NECEvent2014_6_7_scaffold_203_10
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10134..10670
DNA (537bp) protein (179aa)
Rubrerythrin n=2 Tax=Clostridium butyricum RepID=M8JHP3_CLOBU
rubrerythrin family protein
Rubrerythrin {ECO:0000313|EMBL:KJZ85552.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
NECEvent2014_6_7_scaffold_203_11
Ixodes ricinus, Ixodes, Ixodida, Acari, Arthropoda, Metazoa

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10685..11134
DNA (450bp) protein (150aa)
Putative retrotransposon-like 1 n=1 Tax=Ixodes ricinus RepID=V5HRR7_IXORI
Putative retrotransposon-like 1 {ECO:0000313|EMBL:JAB76748.1}; TaxID=34613 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodid
hypothetical protein
NECEvent2014_6_7_scaffold_203_12
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11249..11578
DNA (330bp) protein (110aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A6LQX8_CLOB8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR32758.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain AT
NECEvent2014_6_7_scaffold_203_13
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11638..12159)
DNA (522bp) protein (174aa)
CDP-diacylglycerol--serine O-phosphatidyltransferase (EC:2.7.8.8)
CDP-diacylglycerol--serine O-phosphatidyltransferase {ECO:0000313|EMBL:AGF58887.1}; EC=2.7.8.8 {ECO:0000313|EMBL:AGF58887.1};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Cl
CDP-diacylglycerol--serine O-phosphatidyltransferase n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1N653_9CLOT
NECEvent2014_6_7_scaffold_203_14
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12364..13242
DNA (879bp) protein (293aa)
Diacylglycerol kinase, catalytic region n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LQY0_CLOB8
putative lipid kinase
Diacylglycerol kinase, catalytic region {ECO:0000313|EMBL:ABR32760.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijeri
NECEvent2014_6_7_scaffold_203_15
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13295..13948
DNA (654bp) protein (218aa)
Putative membrane protein n=2 Tax=Clostridium botulinum B RepID=B2TPZ3_CLOBB
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:ACD25014.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Ekl
NECEvent2014_6_7_scaffold_203_16
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14043..15977)
DNA (1935bp) protein (645aa)
UPF0313 protein Cbei_0575 n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LQY2_CLOB8
hypothetical protein
UPF0313 protein Cbei_0575 {ECO:0000256|HAMAP-Rule:MF_01251}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (str
NECEvent2014_6_7_scaffold_203_17
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16321..17583
DNA (1263bp) protein (421aa)
membrane protein n=1 Tax=Clostridium botulinum RepID=UPI0002E72F1A
hypothetical protein
CBS domain protein {ECO:0000313|EMBL:AIY80185.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
NECEvent2014_6_7_scaffold_203_18
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18080..18988
DNA (909bp) protein (303aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
Putative Cysteine synthase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FP81_9CLOT rbh
cysteine synthase
NECEvent2014_6_7_scaffold_203_19
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19015..19599
DNA (585bp) protein (195aa)
cysE; serine O-acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridi
Serine acetyltransferase n=2 Tax=Clostridium botulinum B RepID=B2TPY8_CLOBB
NECEvent2014_6_7_scaffold_203_20
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19603..20592
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EMX1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDG02532.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
iron-sulfur cluster-binding protein
NECEvent2014_6_7_scaffold_203_21
Listeria aquatica, Listeria, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20642..20950)
DNA (309bp) protein (103aa)
PadR family transcriptional regulator n=1 Tax=Clostridium sp. JC122 RepID=UPI0002894AB7
PadR family transcriptional regulator {ECO:0000313|EMBL:EUJ17456.1}; TaxID=1265818 species="Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria.;" source="Listeria aquatica FSL S10-1188.
PadR family transcriptional regulator
NECEvent2014_6_7_scaffold_203_22
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21162..22178
DNA (1017bp) protein (339aa)
Oxidoreductase n=1 Tax=Clostridium intestinale URNW RepID=U2NKS4_9CLOT
Oxidoreductase {ECO:0000313|EMBL:ERK29471.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
NAD(P)-dependent oxidoreductase
NECEvent2014_6_7_scaffold_203_23
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22204..22908
DNA (705bp) protein (235aa)
1-acylglycerol-3-phosphate O-acyltransferase n=1 Tax=Clostridium colicanis 209318 RepID=N9XSC5_9CLOT rbh
1-acylglycerol-3-phosphate O-acyltransferase {ECO:0000313|EMBL:ENZ02593.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium co
acyltransferase family protein
NECEvent2014_6_7_scaffold_203_24
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22909..23568
DNA (660bp) protein (220aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) l
nth; endonuclease III (EC:4.2.99.18)
Endonuclease III n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HF47_9CLOT
NECEvent2014_6_7_scaffold_203_25
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23721..25010
DNA (1290bp) protein (430aa)
PTS system, lactose/cellobiose IIC component family protein (EC:2.7.1.69)
PTS system, lactose/cellobiose IIC component family protein n=2 Tax=Clostridium bifermentans RepID=T4VEA6_CLOBI rbh
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan
NECEvent2014_6_7_scaffold_203_26
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25041..25823
DNA (783bp) protein (261aa)
Helix-turn-helix domain, rpiR family protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0CVP3_CLOSO rbh
SIS domain protein
SIS domain protein {ECO:0000313|EMBL:AIY84599.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
NECEvent2014_6_7_scaffold_203_27
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25799..26971
DNA (1173bp) protein (391aa)
Aminotransferase class I and II family protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4W2W3_CLOBI rbh
Uncharacterized protein {ECO:0000313|EMBL:KJU72841.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
aminotransferase class I and II family protein
NECEvent2014_6_7_scaffold_203_28
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26989..27366
DNA (378bp) protein (126aa)
Putative endoribonuclease L-PSP n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3G6_9CLOT
Endoribonuclease L-PSP {ECO:0000313|EMBL:KJU72842.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
yabJ; rutC family protein yabJ
NECEvent2014_6_7_scaffold_203_29
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27553..28458
DNA (906bp) protein (302aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000
D-alanine--D-alanine ligase family protein (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Clostridium sp. DL-VIII RepID=G7M742_9CLOT
NECEvent2014_6_7_scaffold_203_30
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28494..28673)
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q341_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY22130.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
Displaying items 1-30 of 47 in total

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