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NECEvent2014_6_7_scaffold_263

Alias: 176_007_scaffold_263

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_7_scaffold_263_1
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..400)
DNA (399bp) protein (133aa)
Cell envelope-like function transcriptional attenuator common domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QFC4_9CLOT
cell envelope-related function transcriptional attenuator common domain protein
Cell envelope-related function transcriptional attenuator common domain protein {ECO:0000313|EMBL:AIY82862.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; C
NECEvent2014_6_7_scaffold_263_2
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(552..866)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9Y6R3_9CLOT
cell envelope-related function transcriptional attenuator common domain protein
Cell envelope-related function transcriptional attenuator common domain protein {ECO:0000313|EMBL:AIY82862.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; C
NECEvent2014_6_7_scaffold_263_3
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1036..2001
DNA (966bp) protein (322aa)
biotin-[acetyl-CoA-carboxylase] ligase (EC:6.3.4.15)
Biotin-(Acetyl-CoA-carboxylase) ligase n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5URC9_CLOBO
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978
NECEvent2014_6_7_scaffold_263_4
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2056..3069)
DNA (1014bp) protein (338aa)
Aspartate--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088413}; EC=6.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088403};; Asparagine synthetase A {ECO:0
asnA; aspartate--ammonia ligase (EC:6.3.1.1)
Aspartate-ammonia ligase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HFP8_9CLOT
NECEvent2014_6_7_scaffold_263_5
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3208..4158)
DNA (951bp) protein (317aa)
L-lactate dehydrogenase (EC:1.1.1.27)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488, ECO:0000313|EMBL:AIY82888.1}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488, ECO:0000313|EMBL:A
L-lactate dehydrogenase n=1 Tax=Clostridium colicanis 209318 RepID=N9Y5K7_9CLOT rbh
NECEvent2014_6_7_scaffold_263_6
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4470..5366
DNA (897bp) protein (299aa)
Arginase {ECO:0000256|RuleBase:RU361159}; EC=3.5.3.1 {ECO:0000256|RuleBase:RU361159};; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Cl
Arginase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CAB4_9CLOT
arginase
NECEvent2014_6_7_scaffold_263_7
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5430..6041
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XUU4_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ03488.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
3'-5' exonuclease family protein
NECEvent2014_6_7_scaffold_263_8
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6093..6782)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PRE7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EET88128.1}; Flags: Precursor;; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carb
hypothetical protein
NECEvent2014_6_7_scaffold_263_9
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6779..7666)
DNA (888bp) protein (296aa)
ABC transporter, ATP-binding protein SagG family protein n=1 Tax=Clostridium carboxidivorans P7 RepID=D6MFA7_9CLOT rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERI93574.1}; Flags: Fragment;; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral tax
ABC transporter ATP-binding protein
NECEvent2014_6_7_scaffold_263_10
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7676..8989)
DNA (1314bp) protein (438aa)
membrane protein n=1 Tax=Clostridium botulinum RepID=UPI00030FBABA
Uncharacterized protein {ECO:0000313|EMBL:EET88130.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
hypothetical protein
NECEvent2014_6_7_scaffold_263_11
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9397..10656)
DNA (1260bp) protein (420aa)
Peptidase M48 Ste24p n=1 Tax=Clostridium intestinale URNW RepID=U2PY16_9CLOT rbh
Peptidase M48 Ste24p {ECO:0000313|EMBL:ERK31375.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
Zn-dependent protease with chaperone function
NECEvent2014_6_7_scaffold_263_12
unknown

Not on your lists

10752..11090
DNA (339bp) protein (113aa)

This feature has no annotations

NECEvent2014_6_7_scaffold_263_13
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11136..11852)
DNA (717bp) protein (239aa)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridi
act1; pyruvate formate-lyase-activating enzyme (EC:1.97.1.4)
Pyruvate formate-lyase activating enzyme n=1 Tax=Clostridium sp. DL-VIII RepID=G7LZS6_9CLOT
NECEvent2014_6_7_scaffold_263_14
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11925..14153)
DNA (2229bp) protein (743aa)
Formate acetyltransferase {ECO:0000313|EMBL:EHI98244.1}; EC=2.3.1.54 {ECO:0000313|EMBL:EHI98244.1};; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.
pflB; formate acetyltransferase (EC:2.3.1.54)
Formate acetyltransferase n=1 Tax=Clostridium sp. DL-VIII RepID=G7LZS5_9CLOT rbh
NECEvent2014_6_7_scaffold_263_15
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14369..15043)
DNA (675bp) protein (225aa)
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase {ECO:0000255|HAMAP-Rule:MF_01208}; Short=OPRT {ECO:0000255|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000255|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000255|HAMAP-Rul
Orotate phosphoribosyltransferase n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=PYRE_CLOBA rbh
NECEvent2014_6_7_scaffold_263_16
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15133..16029)
DNA (897bp) protein (299aa)
pyrD; dihydroorotate dehydrogenase 1B (EC:1.3.98.1)
diguanylate cyclase n=1 Tax=Clostridium botulinum RepID=UPI00037A2D67 rbh
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule
NECEvent2014_6_7_scaffold_263_17
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16042..16785)
DNA (744bp) protein (248aa)
diguanylate cyclase n=1 Tax=Clostridium botulinum RepID=UPI0003615EB9 rbh
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; Dihydroorotate oxidase B, electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; TaxID=1491
dihydroorotate dehydrogenase electron transfer subunit
NECEvent2014_6_7_scaffold_263_18
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16809..17678)
DNA (870bp) protein (290aa)
pyrF; orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032256}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032220};; OMP decarboxylase
orotidine 5''''-phosphate decarboxylase n=1 Tax=Clostridium botulinum RepID=UPI00035CE278 rbh
NECEvent2014_6_7_scaffold_263_19
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17691..18887)
DNA (1197bp) protein (399aa)
pyrC; dihydroorotase PyrC (EC:3.5.2.3)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=1345695 species="
Dihydroorotase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MNS9_CLOSA
NECEvent2014_6_7_scaffold_263_20
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18912..19349)
DNA (438bp) protein (146aa)
Aspartate carbamoyltransferase regulatory chain n=2 Tax=Clostridium botulinum B RepID=B2TNG2_CLOBB
aspartate carbamoyltransferase regulatory subunit
Aspartate carbamoyltransferase regulatory chain {ECO:0000313|EMBL:ACD21754.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
NECEvent2014_6_7_scaffold_263_21
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19350..20270)
DNA (921bp) protein (307aa)
pyrB; aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001, ECO:0000313|EMBL:AIY85138.1}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001, ECO:0000313|EMBL:AIY85138.1};; Aspartate transcarbamylase {E
Aspartate carbamoyltransferase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2E0_9CLOT
NECEvent2014_6_7_scaffold_263_22
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20501..21115)
DNA (615bp) protein (205aa)
Putative cyclase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QIH3_9CLOT
Putative cyclase {ECO:0000313|EMBL:EKY27377.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
cyclase family protein
NECEvent2014_6_7_scaffold_263_23
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21102..21734)
DNA (633bp) protein (211aa)
Exopolysaccharide biosynthesis protein n=2 Tax=Clostridium saccharoperbutylacetonicum RepID=M1MSH6_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM69222.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
NECEvent2014_6_7_scaffold_263_24
unknown

Not on your lists

comp(21845..22219)
DNA (375bp) protein (125aa)

This feature has no annotations

NECEvent2014_6_7_scaffold_263_25
unknown

Not on your lists

comp(22237..22797)
DNA (561bp) protein (187aa)

This feature has no annotations

NECEvent2014_6_7_scaffold_263_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22902..24356)
DNA (1455bp) protein (485aa)
Cobyric acid synthase n=2 Tax=Clostridium perfringens RepID=H7CVA4_CLOPF
cobQ; cobyric acid synthase
Cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028, ECO:0000256|SAAS:SAAS00231811}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Cl
NECEvent2014_6_7_scaffold_263_27
Turicibacter sanguinis, Turicibacter, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(24366..25010)
DNA (645bp) protein (215aa)
Conserved domain protein n=2 Tax=Turicibacter RepID=D4W472_9FIRM rbh
Conserved domain protein {ECO:0000313|EMBL:EFF64252.1}; TaxID=702450 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Turicibacter.;" source="Turicibacter sang
hypothetical protein
NECEvent2014_6_7_scaffold_263_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25017..25811)
DNA (795bp) protein (265aa)
iron ABC transporter n=1 Tax=Clostridium sp. JC122 RepID=UPI00028A1ADA rbh
Iron chelate uptake ABC transporter, FeCT family, ATP-binding protein {ECO:0000313|EMBL:EDS81582.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.
iron(III) dicitrate transport system
NECEvent2014_6_7_scaffold_263_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25777..26802)
DNA (1026bp) protein (342aa)
Iron chelate uptake ABC transporter, FeCT family, permease protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BF54_CLOPF
Iron chelate uptake ABC transporter, FeCT family, permease protein {ECO:0000313|EMBL:EDS81556.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
ABC transporter permease
NECEvent2014_6_7_scaffold_263_30
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26795..27706)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8D1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98887.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
iron ABC transporter
Displaying items 1-30 of 49 in total

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