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NECEvent2014_6_7_scaffold_386

Alias: 176_007_scaffold_386

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_7_scaffold_386_1
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..7803)
DNA (7803bp) protein (2601aa)
Putative Cyclic beta 1-2 glucan synthetase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F6W4_9CLOT
Putative Cyclic beta 1-2 glucan synthetase {ECO:0000313|EMBL:CDG00763.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cha
cyclic beta 1-2 glucan synthetase
NECEvent2014_6_7_scaffold_386_2
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7912..8769)
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WCQ7_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ00660.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
Transcriptional regulators of NagC/XylR family
NECEvent2014_6_7_scaffold_386_3
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8785..10161)
DNA (1377bp) protein (459aa)
Aldehyde dehydrogenase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FIV6_9CLOT
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
acyl-CoA reductase family protein
NECEvent2014_6_7_scaffold_386_4
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10182..10928)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEG9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96551.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_6_7_scaffold_386_5
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11135..12025
DNA (891bp) protein (297aa)
yxkH1; putative polysaccharide deacetylase YxkH (EC:3.-.-.-)
Putative polysaccharide deacetylase YxkH {ECO:0000313|EMBL:AGX41381.1}; EC=3.-.-.- {ECO:0000313|EMBL:AGX41381.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiacea
Putative polysaccharide deacetylase YxkH n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MP10_CLOSA rbh
NECEvent2014_6_7_scaffold_386_6
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12122..12883)
DNA (762bp) protein (254aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridiu
Pseudouridine synthase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QKX4_9CLOT rbh
pseudouridine synthase family protein
NECEvent2014_6_7_scaffold_386_7
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12870..13901)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XXP4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJU71816.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
anti-sigma factor family protein
NECEvent2014_6_7_scaffold_386_8
unknown

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14071..14241
DNA (171bp) protein (57aa)

This feature has no annotations

NECEvent2014_6_7_scaffold_386_9
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14283..14756
DNA (474bp) protein (158aa)
ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QM54_9CLOT
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {E
NECEvent2014_6_7_scaffold_386_10
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14792..16075)
DNA (1284bp) protein (428aa)
Putative Na+/H+ antiporter family protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EN89_9CLOT
Sodium:proton antiporter {ECO:0000313|EMBL:KJU71814.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
C4-dicarboxylate anaerobic carrier family protein
NECEvent2014_6_7_scaffold_386_trna_3
unknown

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comp(16153..16225)
DNA (73bp)
transferRNA
NECEvent2014_6_7_scaffold_386_11
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16290..16973)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CFE2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR27993.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
NECEvent2014_6_7_scaffold_386_12
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17173..17583
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WCE6_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJU71811.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
NECEvent2014_6_7_scaffold_386_trna_2
unknown

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comp(17636..17707)
DNA (72bp)
transferRNA
NECEvent2014_6_7_scaffold_386_trna_1
unknown

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comp(17716..17796)
DNA (81bp)
transferRNA
NECEvent2014_6_7_scaffold_386_13
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18106..20124
DNA (2019bp) protein (673aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:000
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F6U0_9CLOT
NECEvent2014_6_7_scaffold_386_14
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20170..21102)
DNA (933bp) protein (311aa)
Fructokinase n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V0W9_CLOBA
fructokinase
Fructokinase {ECO:0000313|EMBL:KIL08233.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
NECEvent2014_6_7_scaffold_386_15
Turicibacter sanguinis, Turicibacter, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(21115..22602)
DNA (1488bp) protein (496aa)
scrB; sucrose-6-phosphate hydrolase (EC:3.2.1.26)
Sucrose-6-phosphate hydrolase n=2 Tax=Turicibacter RepID=D4W557_9FIRM rbh
Sucrose-6-phosphate hydrolase {ECO:0000313|EMBL:EFF64048.1}; TaxID=702450 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Turicibacter.;" source="Turicibacter
NECEvent2014_6_7_scaffold_386_16
Turicibacter sanguinis, Turicibacter, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(22626..24053)
DNA (1428bp) protein (476aa)
PTS system, sucrose-specific, EIIBCA component family protein n=2 Tax=Turicibacter RepID=D4W556_9FIRM rbh
PTS system, sucrose-specific, EIIBCA component family protein {ECO:0000313|EMBL:EFF64047.1}; TaxID=702450 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Turi
pts system, sucrose-specific, eiibca component family protein
NECEvent2014_6_7_scaffold_386_17
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24221..25213)
DNA (993bp) protein (331aa)
Transcriptional regulator n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U2C2_9CLOT rbh
Transcriptional regulator {ECO:0000313|EMBL:EKQ54392.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34
scrR; Transcriptional regulator, LacI family
NECEvent2014_6_7_scaffold_386_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25450..26784)
DNA (1335bp) protein (445aa)
UPI0003D60B64 related cluster n=1 Tax=unknown RepID=UPI0003D60B64
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase {ECO:0000313|EMBL:ENZ30362.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein
NECEvent2014_6_7_scaffold_386_19
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26952..27521)
DNA (570bp) protein (190aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
5-formyltetrahydrofolate cyclo-ligase (EC:6.3.3.2)
Putative=5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FJ80_9CLOT
NECEvent2014_6_7_scaffold_386_20
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27600..28106)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XLW4_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJU71807.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
Displaying 23 items

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