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NECEvent2014_6_7_scaffold_465

Alias: 176_007_scaffold_465

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_7_scaffold_465_1
unknown

Not on your lists

comp(2..121)
DNA (120bp) protein (40aa)

This feature has no annotations

NECEvent2014_6_7_scaffold_465_2
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

290..2911
DNA (2622bp) protein (874aa)
Putative potassium/sodium efflux P-type ATPase, fungal-type n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QPR1_9CLOT rbh
Putative potassium/sodium efflux P-type ATPase, fungal-type {ECO:0000313|EMBL:EKY29552.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=
ATPase P
NECEvent2014_6_7_scaffold_465_3
Bacillus sp. SG-1, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2953..3486)
DNA (534bp) protein (178aa)
GCN5 family N-acetyltransferase n=1 Tax=Bacillus sp. AP8 RepID=UPI0003093168
Uncharacterized protein {ECO:0000313|EMBL:EDL64508.1}; TaxID=161544 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. SG-1.;"
GNAT family acetyltransferase
NECEvent2014_6_7_scaffold_465_4
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3605..4078
DNA (474bp) protein (158aa)
msrA; peptide methionine sulfoxide reductase MsrA (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_014
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1M8W8_9CLOT
NECEvent2014_6_7_scaffold_465_5
unknown

Not on your lists

comp(4206..4748)
DNA (543bp) protein (181aa)

This feature has no annotations

NECEvent2014_6_7_scaffold_465_6
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4764..6656)
DNA (1893bp) protein (631aa)
membrane protein n=1 Tax=Clostridium botulinum RepID=UPI00036F968B rbh
Fusaric acid resistance-like family protein {ECO:0000313|EMBL:AIY79778.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bo
hypothetical protein
NECEvent2014_6_7_scaffold_465_7
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6831..7868)
DNA (1038bp) protein (346aa)
Peptidase M42 family protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MJ65_ALKOO rbh
peptidase M42 family protein
Peptidase M42 family protein {ECO:0000313|EMBL:ABW19847.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (stra
NECEvent2014_6_7_scaffold_465_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7943..9820)
DNA (1878bp) protein (626aa)
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein n=2 Tax=Clostridium difficile RepID=T2YYG2_CLODI
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein {ECO:0000313|EMBL:EQE70230.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Pep
htpG; Heat shock protein 90 (Heat shock proteinHtpG)(High temperature protein G)
NECEvent2014_6_7_scaffold_465_9
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9919..10530)
DNA (612bp) protein (204aa)
UPI0003D66826 related cluster n=1 Tax=unknown RepID=UPI0003D66826
Uncharacterized protein {ECO:0000313|EMBL:KJZ92872.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
NECEvent2014_6_7_scaffold_465_10
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10573..11073)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:265 RepID=R6KMJ7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB74730.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
hypothetical protein
NECEvent2014_6_7_scaffold_465_11
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11083..11631)
DNA (549bp) protein (183aa)
Conserved hypothetical phage-related protein n=1 Tax=Clostridium sp. CAG:265 RepID=R6KXT0_9CLOT
Conserved hypothetical phage-related protein {ECO:0000313|EMBL:CDB74731.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;
phage-like protein
NECEvent2014_6_7_scaffold_465_12
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11869..12204
DNA (336bp) protein (112aa)
Transcriptional regulator PadR family protein n=1 Tax=Clostridium intestinale URNW RepID=U2NKN4_9CLOT
Transcriptional regulator PadR family protein {ECO:0000313|EMBL:ERK29698.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
transcriptional regulator PadR family
NECEvent2014_6_7_scaffold_465_13
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12192..12884
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Clostridium intestinale URNW RepID=U2Q1M9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERK29954.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
hypothetical protein
NECEvent2014_6_7_scaffold_465_14
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12971..13921)
DNA (951bp) protein (317aa)
Polysaccharide deacetylase family protein n=1 Tax=Clostridium sp. CAG:265 RepID=R6KVZ0_9CLOT rbh
Polysaccharide deacetylase family protein {ECO:0000313|EMBL:CDB74076.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" s
polysaccharide deacetylase
NECEvent2014_6_7_scaffold_465_15
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14025..14330)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QBP7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY25115.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
NECEvent2014_6_7_scaffold_465_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14341..15543)
DNA (1203bp) protein (401aa)
DHHA1 domain protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BL21_CLOPF
DHHA1 domain protein {ECO:0000313|EMBL:EDS79527.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495
DHH domain-containing protein
NECEvent2014_6_7_scaffold_465_17
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15536..17053)
DNA (1518bp) protein (506aa)
Transcriptional regulator, GntR family with aminotransferase domain containing protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M4C2_9CLOT
Transcriptional regulator, GntR family with aminotransferase domain containing protein {ECO:0000313|EMBL:EHJ01263.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiac
yisV2; HTH-type transcriptional regulator YisV
NECEvent2014_6_7_scaffold_465_18
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17383..17790)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MV33_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX43327.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM
NECEvent2014_6_7_scaffold_465_19
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17783..18319)
DNA (537bp) protein (179aa)
BioY family protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MUI8_CLOSA
BioY family protein
BioY family protein {ECO:0000313|EMBL:AGX43326.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 1386
NECEvent2014_6_7_scaffold_465_20
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18451..19614)
DNA (1164bp) protein (388aa)
NADH-dependent butanol dehydrogenase {ECO:0000313|EMBL:EES49177.1}; EC=1.1.1.- {ECO:0000313|EMBL:EES49177.1};; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Cl
NADH-dependent butanol dehydrogenase a (EC:1.1.1.-)
NADH-dependent butanol dehydrogenase n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5URI3_CLOBO rbh
NECEvent2014_6_7_scaffold_465_21
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19874..20434
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AH28_CLOBU
RNA-binding region-containing protein (RNP-1) {ECO:0000313|EMBL:EHI97898.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium s
hypothetical protein
NECEvent2014_6_7_scaffold_465_22
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20490..22682)
DNA (2193bp) protein (731aa)
Transglutaminase domain-containing protein n=7 Tax=Clostridium thermocellum RepID=A3DEN4_CLOTH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM69483.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
NECEvent2014_6_7_scaffold_465_23
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22684..23817)
DNA (1134bp) protein (378aa)
Putative uncharacterized protein n=1 Tax=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) RepID=A3DEN5_CLOTH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABN52414.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (st
NECEvent2014_6_7_scaffold_465_24
Cyclobacteriaceae bacterium AK24, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(23810..24043)
DNA (234bp) protein (78aa)
MoxR-like ATPase in aerotolerance operon n=1 Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZYH9_9BACT
MoxR-like ATPase in aerotolerance operon {ECO:0000313|EMBL:EON79140.1}; TaxID=1288963 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassified Cyclobacteriaceae.;" s
ATPase
Displaying 24 items

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