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NECEvent2014_6_7_scaffold_612

Alias: 176_007_scaffold_612

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_7_scaffold_612_1
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(164..628)
DNA (465bp) protein (155aa)
Putative uncharacterized protein n=2 Tax=Clostridium botulinum E RepID=B2UZK9_CLOBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EES49147.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT
NECEvent2014_6_7_scaffold_612_2
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

735..1274
DNA (540bp) protein (180aa)
Putative sporulation protein YyaC n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QI26_9CLOT
Putative sporulation protein YyaC {ECO:0000313|EMBL:EKY27674.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1
sporulation protein YyaC
NECEvent2014_6_7_scaffold_612_3
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1330..2364)
DNA (1035bp) protein (345aa)
Mbl protein n=2 Tax=Clostridium botulinum B RepID=B2TK07_CLOBB
rod shape-determining protein Mbl
Cell shape determining, MreB/Mrl family protein {ECO:0000313|EMBL:AIY79804.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridiu
NECEvent2014_6_7_scaffold_612_4
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2450..2704)
DNA (255bp) protein (85aa)
Stage III sporulation protein D n=2 Tax=Clostridium botulinum B RepID=B2TK06_CLOBB
spoIIID; sporulation transcriptional regulator spoiiid
Stage III sporulation protein D {ECO:0000313|EMBL:AIY82159.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F
NECEvent2014_6_7_scaffold_612_5
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2803..3507)
DNA (705bp) protein (235aa)
Metalloendopeptidase-like membrane protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MLZ7_CLOSA
metalloendopeptidase-like membrane protein
Metalloendopeptidase-like membrane protein {ECO:0000313|EMBL:AGX41543.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sac
NECEvent2014_6_7_scaffold_612_6
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3656..4699)
DNA (1044bp) protein (348aa)
Stage II sporulation protein D n=2 Tax=Clostridium butyricum RepID=B1R2J8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85488.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
sporulation stage II protein D
NECEvent2014_6_7_scaffold_612_7
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4881..6134)
DNA (1254bp) protein (418aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylp
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FPH5_9CLOT
NECEvent2014_6_7_scaffold_612_8
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6156..6797)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6ETS1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDG02650.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
hypothetical protein
NECEvent2014_6_7_scaffold_612_9
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6944..7351)
DNA (408bp) protein (136aa)
ATP synthase epsilon chain n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5ML69_CLOSA
atpC; ATP synthase epsilon chain
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxI
NECEvent2014_6_7_scaffold_612_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7365..8756)
DNA (1392bp) protein (464aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit bet
atpD; F0F1 ATP synthase subunit beta (EC:3.6.3.14)
ATP synthase subunit beta n=4 Tax=Clostridium butyricum RepID=B1R2J4_CLOBU
NECEvent2014_6_7_scaffold_612_11
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8773..9624)
DNA (852bp) protein (284aa)
atpG; F0F1 ATP synthase subunit gamma (EC:3.6.3.14)
ATP synthase gamma chain n=2 Tax=Clostridium botulinum E RepID=ATPG_CLOBA rbh
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=1491
NECEvent2014_6_7_scaffold_612_12
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9662..11176)
DNA (1515bp) protein (505aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit a
atpA; F0F1 ATP synthase subunit alpha (EC:3.6.3.14)
ATP synthase subunit alpha n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGM7_9CLOT
NECEvent2014_6_7_scaffold_612_13

Not on your lists

comp(11187..11726)
DNA (540bp) protein (180aa)
atpH; F0F1 ATP synthase subunit delta (EC:3.6.3.14)
ATP synthase subunit delta n=3 Tax=Clostridium butyricum RepID=B1R2J1_CLOBU
ATP synthase F1, delta subunit {ECO:0000313|EMBL:ETJ16467.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_6_7_scaffold_612_14
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11729..12208)
DNA (480bp) protein (160aa)
atpF; F0F1 ATP synthase subunit B (EC:3.6.3.14)
ATP synthase subunit b n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5URT8_CLOBO
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398, ECO:0000256|RuleBase:RU003849}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:
NECEvent2014_6_7_scaffold_612_15
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12256..12474)
DNA (219bp) protein (73aa)
atpE; F0F1 ATP synthase subunit C (EC:3.6.3.14)
F0F1 ATP synthase subunit C n=1 Tax=Clostridium botulinum RepID=UPI000309D3E0
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242779}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
NECEvent2014_6_7_scaffold_612_16
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12502..13185)
DNA (684bp) protein (228aa)
atpB; F0F1 ATP synthase subunit A (EC:3.6.3.14)
ATP synthase subunit a n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2UZJ4_CLOBA rbh
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:
NECEvent2014_6_7_scaffold_612_17
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13187..13543)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BW10_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR21314.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
NECEvent2014_6_7_scaffold_612_18
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14132..15313)
DNA (1182bp) protein (394aa)
thlA; acetyl-CoA acetyltransferase ThlA (EC:2.3.1.9)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:ETD69108.1}; EC=2.3.1.9 {ECO:0000313|EMBL:ETD69108.1};; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridi
Acetyl-CoA acetyltransferase n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FZJ0_CLOPA
NECEvent2014_6_7_scaffold_612_19
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15431..16579)
DNA (1149bp) protein (383aa)
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:EHI97450.1}; EC=5.1.3.14 {ECO:0000313|EMBL:EHI97450.1};; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Cl
wecB; UDP-N-acetylglucosamine 2-epimerase WecB (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Clostridium sp. DL-VIII RepID=G7MBC3_9CLOT
NECEvent2014_6_7_scaffold_612_20
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16604..17098)
DNA (495bp) protein (165aa)
CMP/dCMP deaminase, zinc-binding protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5ML60_CLOSA
CMP/dCMP deaminase, zinc-binding protein
CMP/dCMP deaminase, zinc-binding protein {ECO:0000313|EMBL:AGX41529.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sacch
NECEvent2014_6_7_scaffold_612_21
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17363..17992)
DNA (630bp) protein (210aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {
upp; uracil phosphoribosyltransferase (EC:2.4.2.9)
Uracil phosphoribosyltransferase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8R0_9CLOT
NECEvent2014_6_7_scaffold_612_22
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18009..18458)
DNA (450bp) protein (150aa)
rpiB; ribose 5-phosphate isomerase B (EC:5.3.1.6)
Ribose-5-phosphate isomerase B n=1 Tax=Clostridium intestinale URNW RepID=U2N9M5_9CLOT
Ribose 5-phosphate isomerase {ECO:0000313|EMBL:KJU73135.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
NECEvent2014_6_7_scaffold_612_23
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18519..18650)
DNA (132bp) protein (44aa)
phosphotyrosine protein phosphatase (EC:3.1.3.48); K01104 protein-tyrosine phosphatase [EC:3.1.3.48]
Putative low molecular weight protein-tyrosine-phosphatase PtpB n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2EFY6_9FIRM
Protein tyrosine phosphatase {ECO:0000313|EMBL:KGK90700.1}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;"
Displaying 23 items

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