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NECEvent2014_6_7_scaffold_709

Alias: 176_007_scaffold_709

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_7_scaffold_709_trna_1
unknown

Not on your lists

comp(9..80)
DNA (72bp)
transferRNA
NECEvent2014_6_7_scaffold_709_1
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(205..798)
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI0002D2CC1A
Uncharacterized protein {ECO:0000313|EMBL:AIY78812.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
hypothetical protein
NECEvent2014_6_7_scaffold_709_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

893..2128
DNA (1236bp) protein (412aa)
NAD n=4 Tax=Clostridium butyricum RepID=B1QU72_CLOBU
Flavoprotein {ECO:0000313|EMBL:KHD13922.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
flavo, family protein
NECEvent2014_6_7_scaffold_709_3
unknown

Not on your lists

comp(2048..2506)
DNA (459bp) protein (153aa)

This feature has no annotations

NECEvent2014_6_7_scaffold_709_4
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2621..2803)
DNA (183bp) protein (61aa)
Uncharacterized protein n=4 Tax=Clostridium botulinum RepID=B2TRE3_CLOBB
hypothetical protein
Hybrid cluster-associated redox disulfide domain protein {ECO:0000313|EMBL:AIY80438.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="C
NECEvent2014_6_7_scaffold_709_5
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2893..4179)
DNA (1287bp) protein (429aa)
purA; adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase {ECO:0000255|HAMAP-Rule:MF_00011}; Short=AMPSase {ECO:0000255|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000255|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000255|HAMAP-Rule:MF_00
Adenylosuccinate synthetase n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=PURA_CLOBA
NECEvent2014_6_7_scaffold_709_6
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4349..5521
DNA (1173bp) protein (391aa)
Malate dehydrogenase n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FRK7_CLOPA
Malate dehydrogenase {ECO:0000313|EMBL:ETD66929.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;
malate dehydrogenase
NECEvent2014_6_7_scaffold_709_7
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5790..6587)
DNA (798bp) protein (266aa)
proC; pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UVY3_CLOBO
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000313|EMBL:KIL08327.1}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};;
NECEvent2014_6_7_scaffold_709_8
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6609..7943)
DNA (1335bp) protein (445aa)
dnaC; replicative DNA helicase DnaC (EC:3.6.4.12)
Replicative DNA helicase DnaC {ECO:0000313|EMBL:AGX45451.1}; EC=3.6.4.12 {ECO:0000313|EMBL:AGX45451.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostri
Replicative DNA helicase DnaC n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5N0L6_CLOSA
NECEvent2014_6_7_scaffold_709_9
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7966..9861)
DNA (1896bp) protein (632aa)
Lon family ATP-dependent protease n=1 Tax=Clostridium colicanis 209318 RepID=N9XXA4_9CLOT rbh
ATPase AAA {ECO:0000313|EMBL:KJU71769.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
lonC; ATP-dependent protease, Lon family
NECEvent2014_6_7_scaffold_709_10
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(9874..10320)
DNA (447bp) protein (149aa)
50S ribosomal protein L9 n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FRF8_CLOPA
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostr
rplI; 50S ribosomal protein L9
NECEvent2014_6_7_scaffold_709_11
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10322..12265)
DNA (1944bp) protein (648aa)
DHH family protein n=2 Tax=Clostridium botulinum B RepID=B2TRG3_CLOBB
DHH family protein {ECO:0000313|EMBL:AIY81665.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
DHH family protein
NECEvent2014_6_7_scaffold_709_12
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12281..12613)
DNA (333bp) protein (111aa)
Putative uncharacterized protein n=2 Tax=Clostridium botulinum E RepID=B2V1T4_CLOBA
hypothetical protein
MazG-like family protein {ECO:0000313|EMBL:KIL08333.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
NECEvent2014_6_7_scaffold_709_13
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(12793..13038)
DNA (246bp) protein (82aa)
30S ribosomal protein S18 n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QPJ5_9CLOT
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.
rpsR; ribosomal protein S18
NECEvent2014_6_7_scaffold_709_14
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13065..13523)
DNA (459bp) protein (153aa)
Single-stranded DNA-binding protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FQ57_9CLOT
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1351755 species="Bacteria; Firmicutes; Clostri
ssb; single-stranded DNA-binding family protein
NECEvent2014_6_7_scaffold_709_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(13538..13825)
DNA (288bp) protein (96aa)
30S ribosomal protein S6 n=4 Tax=Clostridium butyricum RepID=B1QSP7_CLOBU
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str.
rpsF; 30S ribosomal protein S6
NECEvent2014_6_7_scaffold_709_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13924..14118)
DNA (195bp) protein (65aa)
UPI0003D679CE related cluster n=1 Tax=unknown RepID=UPI0003D679CE
Uncharacterized protein {ECO:0000313|EMBL:ETI91985.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
NECEvent2014_6_7_scaffold_709_17
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14118..15005)
DNA (888bp) protein (296aa)
Mechanosensitive ion channel family protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V1T9_CLOBA
mechanosensitive ion channel family protein
Mechanosensitive ion channel protein {ECO:0000313|EMBL:KIL08338.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
NECEvent2014_6_7_scaffold_709_18
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15017..15256)
DNA (240bp) protein (80aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JFL3_CLOBU
No significant y {ECO:0000313|EMBL:KJZ87015.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein DUF3343
Displaying 19 items

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