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NECEvent2014_6_7_scaffold_734

Alias: 176_007_scaffold_734

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_7_scaffold_734_1
unknown

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1..132
DNA (132bp) protein (44aa)

This feature has no annotations

NECEvent2014_6_7_scaffold_734_2
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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246..1427
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QBQ6_9CLOT
transporter associated domain protein
Transporter associated domain protein {ECO:0000313|EMBL:AIY84866.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii
NECEvent2014_6_7_scaffold_734_3
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1481..1942
DNA (462bp) protein (154aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiac
tRNA-specific adenosine deaminase TadA n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5N0A2_CLOSA
tadA; tRNA-specific adenosine deaminase TadA
NECEvent2014_6_7_scaffold_734_4
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1946..2713
DNA (768bp) protein (256aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=1415775
prolipoprotein diacylglyceryl transferase n=1 Tax=Clostridium botulinum RepID=UPI0002FCF31B rbh
lgt; prolipoprotein diacylglyceryl transferase
NECEvent2014_6_7_scaffold_734_trna_1
unknown

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2854..2940
DNA (87bp)
transferRNA
NECEvent2014_6_7_scaffold_734_5
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3363..3854)
DNA (492bp) protein (164aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridiu
folA; dihydrofolate reductase (EC:1.5.1.3)
Dihydrofolate reductase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FCT7_9CLOT
NECEvent2014_6_7_scaffold_734_6
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3854..4645)
DNA (792bp) protein (264aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:000
thyA; Thymidylate synthase (EC:2.1.1.45)
Thymidylate synthase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QP43_9CLOT rbh
NECEvent2014_6_7_scaffold_734_7
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4761..6407
DNA (1647bp) protein (549aa)
dnaX; DNA polymerase III, subunit gamma and tau (EC:2.7.7.7)
Putative DNA polymerase III, gamma and tau subunit n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F2L7_9CLOT
Putative DNA polymerase III, gamma and tau subunit {ECO:0000313|EMBL:CDG02866.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostri
NECEvent2014_6_7_scaffold_734_8
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6474..6818
DNA (345bp) protein (115aa)
Nucleoid-associated protein CCH01_000160 n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EUE5_9CLOT
Nucleoid-associated protein CCH01_000160 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium c
DNA-binding protein, YbaB/EbfC family
NECEvent2014_6_7_scaffold_734_9
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6886..7482
DNA (597bp) protein (199aa)
Recombination protein RecR n=4 Tax=Clostridium butyricum RepID=B1QY73_CLOBU
recR; recombination protein RecR
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=
NECEvent2014_6_7_scaffold_734_10
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7693..7971
DNA (279bp) protein (93aa)
Putative uncharacterized protein n=2 Tax=Clostridium botulinum E RepID=B2V0V9_CLOBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIL08223.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
NECEvent2014_6_7_scaffold_734_11
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7991..8266
DNA (276bp) protein (92aa)
Putative Sigma-K factor processing regulatory protein BofA n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EUE0_9CLOT
Putative Sigma-K factor processing regulatory protein BofA {ECO:0000313|EMBL:CDG02860.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=
bofA; pro-sigmaK processing inhibitor BofA family protein
NECEvent2014_6_7_scaffold_734_12
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8649..9563
DNA (915bp) protein (305aa)
ABC transporter n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BT48_9CLOT
ABC transporter family protein
ABC transporter family protein {ECO:0000313|EMBL:AIY83476.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Su
NECEvent2014_6_7_scaffold_734_13
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9563..10789
DNA (1227bp) protein (409aa)
Putative membrane protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V0V6_CLOBA
ABC-2 transporter family protein
ABC-2 transporter family protein {ECO:0000313|EMBL:AIY82760.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str.
NECEvent2014_6_7_scaffold_734_14
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10942..11127
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M7L4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHJ02403.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
hypothetical protein
NECEvent2014_6_7_scaffold_734_15
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11348..12421
DNA (1074bp) protein (358aa)
Putative phosphoserine aminotransferase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HIQ6_9CLOT
Putative phosphoserine aminotransferase {ECO:0000313|EMBL:EEH99761.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2
aspartate aminotransferase
NECEvent2014_6_7_scaffold_734_16
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12499..13407
DNA (909bp) protein (303aa)
serA; D-3-phosphoglycerate dehydrogenase SerA (EC:1.1.1.95)
Phosphoglycerate dehydrogenase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HHA5_9CLOT
Phosphoglycerate dehydrogenase {ECO:0000313|EMBL:EEH99762.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
NECEvent2014_6_7_scaffold_734_17
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13429..14685
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MXM2_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX45335.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM
Displaying 18 items

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