ggKbase home page

NECEvent2014_6_7_scaffold_819

Alias: 176_007_scaffold_819

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_7_scaffold_819_1
Clostridium paraputrificum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..207)
DNA (207bp) protein (69aa)
Chitinase A n=1 Tax=Clostridium paraputrificum RepID=Q9ZNL0_9CLOT
Chitinase A {ECO:0000313|EMBL:BAA34922.1}; TaxID=29363 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium paraputrificum.;"
glycosyl hydrolases 18 family protein
NECEvent2014_6_7_scaffold_819_2
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(387..3029)
DNA (2643bp) protein (881aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|H
valS; valine--tRNA ligase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Clostridium colicanis 209318 RepID=N9Y170_9CLOT rbh
NECEvent2014_6_7_scaffold_819_3
Planomicrobium sp. ES2, Planomicrobium, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3352..3861)
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Bacillus sp. 10403023 RepID=UPI000289BCCB
Uncharacterized protein {ECO:0000313|EMBL:CEG22819.1}; TaxID=1499687 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Planomicrobium.;" source="Planomicrobium sp. ES2.;"
hypothetical protein
NECEvent2014_6_7_scaffold_819_4
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3961..4212)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HFM7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98663.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
NECEvent2014_6_7_scaffold_819_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4245..4370)
DNA (126bp) protein (42aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=B1BV94_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT26785.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
NECEvent2014_6_7_scaffold_819_6
Bacillus sp. B-jedd, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4433..5701)
DNA (1269bp) protein (423aa)
Oxidoreductase n=1 Tax=Oceanobacillus iheyensis (strain DSM 14371 / JCM 11309 / KCTC 3954 / HTE831) RepID=Q8ETK8_OCEIH
Glycosyl hydrolase family protein {ECO:0000313|EMBL:CEG25455.1}; TaxID=1476857 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. B-jedd.;"
oxidoreductase
NECEvent2014_6_7_scaffold_819_7
unknown

Not on your lists

comp(5714..6265)
DNA (552bp) protein (184aa)

This feature has no annotations

NECEvent2014_6_7_scaffold_819_8
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6336..7568)
DNA (1233bp) protein (411aa)
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase {ECO:0000255|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000255|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000255|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000255|HAM
serine hydroxymethyltransferase n=1 Tax=Clostridium botulinum RepID=UPI00037F47A0 rbh
NECEvent2014_6_7_scaffold_819_9
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7698..8465
DNA (768bp) protein (256aa)
Membrane spanning protein n=2 Tax=Clostridium botulinum B RepID=B2TN40_CLOBB
membrane spanning protein
Membrane spanning protein {ECO:0000313|EMBL:ACD23460.1}; Putative membrane protein {ECO:0000313|EMBL:CDH89993.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
NECEvent2014_6_7_scaffold_819_10
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8465..8926
DNA (462bp) protein (154aa)
Membrane spanning protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UYQ0_CLOBO
membrane spanning protein
Membrane spanning protein {ECO:0000313|EMBL:EES49675.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'Bo
NECEvent2014_6_7_scaffold_819_11
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9160..10035
DNA (876bp) protein (292aa)
Cation efflux family protein n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IGK0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ87062.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
cation efflux protein
NECEvent2014_6_7_scaffold_819_12
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10047..10520
DNA (474bp) protein (158aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LTM2_CLOB8
ErfK/YbiS/YcfS/YnhG family protein
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:AJG98344.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (
NECEvent2014_6_7_scaffold_819_13
unknown

Not on your lists

comp(10568..10969)
DNA (402bp) protein (134aa)

This feature has no annotations

NECEvent2014_6_7_scaffold_819_14
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11053..11451
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QK18_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY28303.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
NECEvent2014_6_7_scaffold_819_15
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11531..12139)
DNA (609bp) protein (203aa)
K+-dependent Na+/Ca+ exchanger protein n=2 Tax=Clostridium botulinum B RepID=B2TN43_CLOBB
K+-dependent Na+/Ca+ exchanger-like protein
Inner membrane protein YrbG, predicted calcium/sodium:proton antiporter {ECO:0000313|EMBL:CDH89996.1}; K+-dependent Na+/Ca+ exchanger protein {ECO:0000313|EMBL:ACD23192.1}; TaxID=935198 species="Bacte
Displaying 15 items

View Taxonomy