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NECEvent2014_6_7_scaffold_731_8

Organism: NECEvent2014_6_7_Clostridium_paraputrificum_30_154

near complete RP 49 / 55 MC: 1 BSCG 51 / 51 ASCG 15 / 38 MC: 1
Location: 3924..7628

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 90.6
  • Coverage: 999.99
  • Bit_score: 2244
  • Evalue 0.0
rpoB; DNA-directed RNA polymerase, beta subunit (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 89.6
  • Coverage: 999.99
  • Bit_score: 2222
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EUU2_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 90.6
  • Coverage: 999.99
  • Bit_score: 2244
  • Evalue 0.0

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Taxonomy

Clostridium chauvoei → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3705
ATGGTACATCCTGTCCAAGTTGGGAAAAGAACAAGAATGAGTTTTGGTAAGGTTAAAGACGTAACCGAAATGCCAAATCTAATTGAAGTACAATTAGATTCGTATCAGTGGTTTTTAAGAGAAGGGCTTCATGAGGTTTTTGATGATGTCAATCCGATAAGCAACTTTACTGGTAATCTAGTACTTGAATTCGTAGACTATAAGCTTGATATGGATAATATTAAGTATTCAGTGGAAGAGTGTAAGGAAAGAGACGCTACTTATGCTGCACCACTAAAGGTTTCTGTAAGATTACAGAACAATGAAACAGGAGAAATAAAAGAACAAGAAGTCTTCATGGGTGATTTCCCATTAATGACTGAACAAGGAACTTTTATTATTAATGGTGCTGAAAGAGTAATAGTCAGCCAATTAGTAAGATCTCCAGGTGTATATTACAGTTATAGTAGAGATAAGAGTGGTAAAAAGCTGTTTTCTTCTACAGTAATTCCAAACAGAGGAGCTTGGTTAGAATATGAAACTGACTCTAATGACGTAATATATGTAAGAATTGATAAGACTAGAAAGCTACCAATCACTATTTTAGGAAGAGCAATGGGATTTGGAAGTGATCAAGAATTATTAGATTACTTTGGAGAAGAAGAAAGATTCAAGGCAACAATTGAAAAAGACAATACTAAAACGAAAGAAGAAGCACTATTAGAAATCTATAAAAGATTAAGACCAGGTGAACCACCTACAGTAGATAGTGCAGTATCTTTAATTGATTCTTTATTCTTTGATGCAAAAAGATATGATTTGTCTAGAGTAGGTAGATATAAGTTCAACAAGAAACTTGCATTAAACTTAAGAATTGCAAATCAAATAGCTGCTAATGACATTATTAATCCATCAACTGGAGAAATAATGGTTGAAAGCGGCCAAAAAATTAGTAGAACAATTGCTGAAGAAATTAGAAATGTAGGAATAAATTCAGTTGATGTTTTAGTGGAAGATAGAGTTGTAAGAGTAATCGGAAATAACTTTGTTGATATAACTAAGCATGTTAACTTTGATGTAACAGACTTAAACATTAAGGAATATGTACATTACCCTACATTAAGAGAAATTTTAGATAATTACTCTGATGAAGATTCAATAAAAGAAGAAATCAAGAAAAATATCAATAAATTAATTCCTAAGCATATTATAAGAGATGATATTTTTGCGACTATTAGTTACGAAATTGGATTGGCTTATAATATAGGATATGTTGACGATATTGATCATCTTGGAAATAGAAGAATTAGATCAGTTGGTGAATTACTACAAAACCAATTTAGAATTGGTTTATCAAGAATGGAAAGAGTAGTTAAAGAAAGAATGACTATTCAAGATCAAGAAGCAATTACTCCTCAAATGTTAATAAACATTAGACCAGTAGCTGCTGCTATTAAAGAATTCTTTGGTAGTTCTCAATTATCACAATTCATGGATCAGATTAACCCACTTTCAGAATTAACTCACAAGAGAAGATTATCTGCTCTTGGACCAGGTGGTTTATCAAGAGAAAGAGCTGGTTTTGAAGTTAGAGACGTTCACCATTCTCATTATGGAAGAATGTGTCCTATCGAGACTCCAGAAGGACCTAACATAGGTCTTATAAACTCCTTAGCAACATTTGCAAGAGTTAATGAATATGGGTTTATAGAAACACCATATAGAATTATAGATAAAGAAACTAATACAATTACAAATGAAATAAGATATTTTACGGCAGATGAGGAAGATCAATATTTAGTTGCACAAGCTAAAGAACCGATTGACGGAAATGGTCACTTTGTTGATAAAAAGGTAACAGTAAGAAATAAGGAAGATGTATTTGTTGTACCAGCAGAAGATGTAGATTTAATAGACGTATCGCCTAGACAAATAGTATCAGTTGCTACTGCAATGATACCTTTCCTTGAGAATGACGATGCCTCAAGAGCACTGATGGGATCAAACATGCAACGTCAAGCTGTTCCATTATTAAAGACTCAAGCTCCTATCGTTGGTACAGGAATAGAGTACAAAGCAGCAGTAGACTCAGGAGTACTTCCTAAGGCTAAAAATGCTGGTGTTGTAACTTATGTAAGTGCTAACGAAGTGAGAATTAAAAGAGATATTGATGGCGGAATTGATACTTATAAATTACTTAAGTTTAAGAGAAGTAACCAAGGTATGTGCATAAATCAACGACCAATAGTTGATAAAGGTGAAATAGTATTTAAGAATCAAGTATTAGCTGATGGTCCATCAACAGATCTAGGTGAAATATCATTAGGTAAAAATATCAGAATGGGATTCATTACGTGGGAAGGATATAACTACGAAGATGCTATGCTTATTTCTGAAGAACTAGTTAGAGAAGATGTATTTACATCTATTCATATAGAAGAATATGAATGTGAAGCTAGAGACACAAAATTAGGACCAGAAGAAATTACTAGAGATATTCCTAATGTAAGTGAAGATGCACTTAAGGATATCGATGAAAGAGGAATAATAAGAGTAGGTGCTGAAGTAAGATCTGGAGATATTCTTGTTGGTAAGGTTACTCCAAAGGGTGAAACTGAATTAACAGCTGAAGAAAGACTGTTAAGAGCAATATTCGGTGAAAAGGCAAGAGAAGTAAGAGATACTTCATTAAGAGCTCCTCATGGTGAAGCTGGTATAATTGTAGATGTTAAAGTGTTTACAAGAGAAAATGGAGACGAATTAAATCCAGGCGTAAATGAACTTGTAAGAGCTTATATTGCGCAAAAGAGAAAGATATCTGTAGGGGATAAGATGGCTGGACGTCATGGTAACAAGGGGGTTATCTCAAGAGTACTTCCTGAAGAAGATATGCCATTTTTACCAGACGGAAGACCGCTACAAATATGTTTAAATCCTCTAGGGGTTCCTTCACGTATGAACATCGGTCAGGTACTTGAAGTTCACTTAGGATGGGCTGCTAGCCAATTAGGATGGCATATAGCTACTCCAGTATTTGATGGAGCAACTGAAGAAGATATAGAAGAATGTCTTGAAAAAGCAGGTTATAATGCTAATGGTAAAACTGTTTTATATGATGGTAGAACAGGAGAACCATTTGATAATGAAGTTACAGTTGGTATAATGTATATCTTAAAGCTAGCTCACTTAGTTGACGATAAGATTCATGCTAGATCAACTGGACCATACTCACTAGTTACACAACAACCACTTGGAGGTAAAGCTCAATTTGGTGGTCAAAGATTTGGTGAAATGGAAGTTTGGGCATTAGAAGCATATGGTGCTGCGCATACATTACAAGAAATATTAACTGTTAAGTCAGATGATGTTGTAGGTAGAGTTAAGACATATGAAGCAATAGTTAAGGGTGAAAATATCCCTGAACCAGGTGTTCCAGAATCATTTAAGGTTCTTATTAAAGAACTTCAAGCTCTTTGCTTAGACATTAAAGTTTTAAATGAAGAAAATCAAGAAGTTCAATTAAAAGAATTCGCAGATGAGGATATGGAAAACTTAGAGGTGAATATAGAAGGAACAGAAGAATTTACTTCTGAACCAGAAGCGGAAATTGATGATAGCTATACAGTAGAAGAAGTAGAACCAGAACAAGAAGAAGATTTCGAAAGTTTTCAAATCGAGGGACTACAAGAAGATTTAGTACTAGATGATTTTAATGACGAACACTAA
PROTEIN sequence
Length: 1235
MVHPVQVGKRTRMSFGKVKDVTEMPNLIEVQLDSYQWFLREGLHEVFDDVNPISNFTGNLVLEFVDYKLDMDNIKYSVEECKERDATYAAPLKVSVRLQNNETGEIKEQEVFMGDFPLMTEQGTFIINGAERVIVSQLVRSPGVYYSYSRDKSGKKLFSSTVIPNRGAWLEYETDSNDVIYVRIDKTRKLPITILGRAMGFGSDQELLDYFGEEERFKATIEKDNTKTKEEALLEIYKRLRPGEPPTVDSAVSLIDSLFFDAKRYDLSRVGRYKFNKKLALNLRIANQIAANDIINPSTGEIMVESGQKISRTIAEEIRNVGINSVDVLVEDRVVRVIGNNFVDITKHVNFDVTDLNIKEYVHYPTLREILDNYSDEDSIKEEIKKNINKLIPKHIIRDDIFATISYEIGLAYNIGYVDDIDHLGNRRIRSVGELLQNQFRIGLSRMERVVKERMTIQDQEAITPQMLINIRPVAAAIKEFFGSSQLSQFMDQINPLSELTHKRRLSALGPGGLSRERAGFEVRDVHHSHYGRMCPIETPEGPNIGLINSLATFARVNEYGFIETPYRIIDKETNTITNEIRYFTADEEDQYLVAQAKEPIDGNGHFVDKKVTVRNKEDVFVVPAEDVDLIDVSPRQIVSVATAMIPFLENDDASRALMGSNMQRQAVPLLKTQAPIVGTGIEYKAAVDSGVLPKAKNAGVVTYVSANEVRIKRDIDGGIDTYKLLKFKRSNQGMCINQRPIVDKGEIVFKNQVLADGPSTDLGEISLGKNIRMGFITWEGYNYEDAMLISEELVREDVFTSIHIEEYECEARDTKLGPEEITRDIPNVSEDALKDIDERGIIRVGAEVRSGDILVGKVTPKGETELTAEERLLRAIFGEKAREVRDTSLRAPHGEAGIIVDVKVFTRENGDELNPGVNELVRAYIAQKRKISVGDKMAGRHGNKGVISRVLPEEDMPFLPDGRPLQICLNPLGVPSRMNIGQVLEVHLGWAASQLGWHIATPVFDGATEEDIEECLEKAGYNANGKTVLYDGRTGEPFDNEVTVGIMYILKLAHLVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAHTLQEILTVKSDDVVGRVKTYEAIVKGENIPEPGVPESFKVLIKELQALCLDIKVLNEENQEVQLKEFADEDMENLEVNIEGTEEFTSEPEAEIDDSYTVEEVEPEQEEDFESFQIEGLQEDLVLDDFNDEH*