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NECEvent2014_6_7_scaffold_731_9

Organism: NECEvent2014_6_7_Clostridium_paraputrificum_30_154

near complete RP 49 / 55 MC: 1 BSCG 51 / 51 ASCG 15 / 38 MC: 1
Location: 7650..11180

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 88.7
  • Coverage: 999.99
  • Bit_score: 2098
  • Evalue 0.0
rpoC; DNA-directed RNA polymerase, beta' subunit (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 88.5
  • Coverage: 999.99
  • Bit_score: 2097
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H649_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 88.6
  • Coverage: 999.99
  • Bit_score: 2092
  • Evalue 0.0

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Taxonomy

Clostridium baratii → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3531
TTGTTTGAGTTAAATAATTTTGATGCAATACAAATAGGATTAGCATCTCCTGAGCAAGTAAGAAAATGGTCAAGAGGAGAAGTTAAGAAACCAGAAACAATAAACTATAGAACATTAAAGCCTGAAAGAGATGGTCTATTCTGTGAAAGAATATTTGGACCAATGAAGGATTGGGAATGTCACTGTGGTAAATATAAAAGAGTAAGATATAAAGGTATAGTTTGTGATAGATGTGGAGTTGAAGTCACAAAGGCTAAAGTTAGAAGAGAGAGAATGGGGCATATAGAACTGGCTGCCCCAGTATCTCATATATGGTACTTCAAAGGAATTCCATCAAGAATGGGATTAATACTTGATATGTCACCAAGAGCTTTAGAAAAAATACTATACTTTGCTTCATACGTAGTAATTGATCCTAAGGAAACACCACTTTTAAAGAAGCAACTTCTTAATGAAAAAGAATATAGAGAAGCTGCAGATAAATATGGTGAAGAAAGCTTTGTTGCAGGTATGGGTGCAGAAGCTGTTAAACAACTTCTAGGAGAAATAGATTTAGAAGCACAATCTATAGAGTTAAAAGAAGAGTTAAAGCAAAGTACAGGTCAAAAAAAGGTAAGAATAATTAGAAGACTTGAAGTTATTGAATCCTTCAAAAAGTCTGGTAATGATCCAAAGTGGATGATTATAGATGTAATTCCTGTTATTCCACCAGATTTAAGACCAATGGTACAATTAGATGGTGGAAGATTTGCAACATCTGATTTAAATGATCTTTACAGAAGAGTTATAAATAGAAATAACAGACTTAAGAAGTTATTAGATTTAGGAGCTCCTGATATCATTGTTAGAAATGAAAAAAGAATGCTTCAAGAAGCAGTAGATGCTCTTGTAGATAATGGAAGAAGAGGAAGAGCTGTAACAGGTCCTGGTAATAGACCATTAAAGTCTTTATCAGATATGCTTAAAGGTAAGCAAGGTAGATTTAGACAAAACTTACTTGGTAAGAGAGTTGACTACTCAGGTAGATCTGTTATCGTTGTTGGTCCAGAATTAAAAATGTACCAATGTGGTCTTCCTAAAGAAATGGCTCTTGAATTATTCAAGCCATTTGTAATGAAAAAATTAGTTGAAGATGGAATAGCTCATAACATAAAGAGTGCTAAGAGAATGGTAGAGAGAGTAATGCCACAAGTATGGGATGTATTAGAAGAAGTTATTGCAGACCATCCGGTATTATTAAACCGTGCTCCTACACTTCACAGATTAGGTATTCAAGCATTCCAACCAGTATTAGTTGAAGGTAGAGCTATAAAGTTACATCCATTAGTTTGTACAGCATATAATGCTGACTTTGATGGTGACCAAATGGCTGTTCACGTACCTTTATCTGTAGAAGCACAAGCAGAAGCAAGATTTTTAATGCTTGCGGCTGGTAACATATTAAAGCCATCTGATGGTAAACCAGTTTGTGTTCCTACTCAAGATATGGTTCTTGGTTCTTATTATTTAACAATAGATAAGGAACAAGAAAAGGAAGATAAATATTTCTACTCAAAAGAAGAAGCTATAATGGCTTATGAGTTAAAAGAAATAGGAGTACATGATAAAATACATGTAAAGTTATTTAAGACTGTAGATGGAGTTGAAAAAACAGGAATAATTAAAACTACTGTTGGTAAATTAATATTCAATGAATCAATTCCACAAGATCTTGGATTTGTTGATAGAAATAATAAAGATGAAGAGTTTAACTTAGAAGTAGACTTCTTAGTTACTAAGAAATCTTTAGGTAAGATAATAGATAAGTGTTACTTAAAGCATGGTCCAACTGAAACTTCGATAATGTTGGATAAAATAAAAGCCTTAGGATATCACTATTCGTCAATCGGAGCTATAACTGTTGCTGCATCAGATATGATTGTACCTAAAGAAAAGTATGATTTATTAAGAGATGCGGATGAAACAATAGAAAAGATTGAAAAAATGTATAAAAGAGGTTTCATATCTGATGATGAAAGATATGAAAGAGTTATAGAAAAATGGACTAAGACAACTGAAGAAGTTGCTGATACTCTAATGGAAAGCCTTGATAAATTTAACCCAATATTTATGATGGCTGACTCTGGTGCCAGAGGTTCTAAGTCACAAATTAAGCAATTAGCTGGTATGAGAGGACTTATGGCAAGTCCATCTGGTAAGATTATAGAATTACCAATTAGAGCATCCTTTAGAGAAGGTCTAGATGTACTTGAATACTTCTTATCTACTCACGGAGCTAGAAAAGGTAATGCCGATACCGCCTTAAAGACTGCCGATTCAGGATACTTAACTAGAAGATTAGTTGATGTTTCTCAAGACGTAATTGTAAGAGAAGAAGACTGTGGCGCTACAGATGGTATGGTTGTATCTGAAATTAGAGAAGGTAATGAAGTTGTTGAAGGCTTAGCTGAAAGATTAACAGGTAGATATCTTGCAGAAGATGTAATAAACCCTTCTACAGGAGAAGTTATTGCTAATAACGATACTTATGTTGATTCAGAAATGGCAGAAACAATAGTAGCCACAGGAGTTAAAAAGGTTAAAATTAGATCTGTATTTACATGTAAGTGTAAAATAGGTGTATGTGCTAAGTGTTATGGAATGAATATGGCTACTGCTAAGAAGATAAACATAGGTGAAGCAGTTGGTATAATAGCTGCTCAATCTATCGGTGAACCAGGAACTCAGCTTACAATGAGAACATTCCATACAGGTGGTGTTGCCGGTGCGGATATAACACAAGGTCTTCCTAGAGTTGAAGAATTATTTGAAGCTAGAAAACCTAAGGGGCTTGCAATTGTAAGTGAAATTAGTGGTACTGTAAGAATAGAGGAAACTAAGAAAAAGAGAACTGTATATGTAATGGGAGCTGATGGCGAAGAAAAGAGCTATGATATTCCATTTGGATCAAGACTAAAAGTTAACGATAATGATGTTATAGAAGCTGGAGATGAAGTTACAGAAGGTTCTGTTAACCCACATGATATCATGAATATCAAGGGTATAGATGGTGCTAGAAGATATCTGCTTAGTGAAGTTCAAAAAGTTTATAGACTTCAAGGGGTTGATATTAATGATAAGCACTTAGAAGTAGTTGTTAGACAAATGACTAGAAAGATTAAAGTTACAGATTCTGGTGATACTGAACTATTACCTGGAACAATGATTGATATATTTGACTTCGAAGAAGCAAATGAAAAGGTAAGAGAGTTTGGTGGAGAAGAAGCTACAGGAGAACAAGCGCTATTAGGAATTACTAAAGCTGCTCTTGCAACTGACAGTTTCTTATCAGCAGCATCATTCCAAGAAACAACAAGAGTACTTACAGAAGCTGCAATAAAGGGTAAAACTGATCCTCTTGTTGGATTGAAGGAAAATGTAATAATAGGTAAGCTGATTCCAGCTGGAACTGGTATGATGAGATACAGATCAGTAAAGCTTGATGTTGAAGAAGATTTAACTATGGATGACAGCTTATTAAAGGTAGAATAA
PROTEIN sequence
Length: 1177
LFELNNFDAIQIGLASPEQVRKWSRGEVKKPETINYRTLKPERDGLFCERIFGPMKDWECHCGKYKRVRYKGIVCDRCGVEVTKAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLILDMSPRALEKILYFASYVVIDPKETPLLKKQLLNEKEYREAADKYGEESFVAGMGAEAVKQLLGEIDLEAQSIELKEELKQSTGQKKVRIIRRLEVIESFKKSGNDPKWMIIDVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKKLLDLGAPDIIVRNEKRMLQEAVDALVDNGRRGRAVTGPGNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKMYQCGLPKEMALELFKPFVMKKLVEDGIAHNIKSAKRMVERVMPQVWDVLEEVIADHPVLLNRAPTLHRLGIQAFQPVLVEGRAIKLHPLVCTAYNADFDGDQMAVHVPLSVEAQAEARFLMLAAGNILKPSDGKPVCVPTQDMVLGSYYLTIDKEQEKEDKYFYSKEEAIMAYELKEIGVHDKIHVKLFKTVDGVEKTGIIKTTVGKLIFNESIPQDLGFVDRNNKDEEFNLEVDFLVTKKSLGKIIDKCYLKHGPTETSIMLDKIKALGYHYSSIGAITVAASDMIVPKEKYDLLRDADETIEKIEKMYKRGFISDDERYERVIEKWTKTTEEVADTLMESLDKFNPIFMMADSGARGSKSQIKQLAGMRGLMASPSGKIIELPIRASFREGLDVLEYFLSTHGARKGNADTALKTADSGYLTRRLVDVSQDVIVREEDCGATDGMVVSEIREGNEVVEGLAERLTGRYLAEDVINPSTGEVIANNDTYVDSEMAETIVATGVKKVKIRSVFTCKCKIGVCAKCYGMNMATAKKINIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGADITQGLPRVEELFEARKPKGLAIVSEISGTVRIEETKKKRTVYVMGADGEEKSYDIPFGSRLKVNDNDVIEAGDEVTEGSVNPHDIMNIKGIDGARRYLLSEVQKVYRLQGVDINDKHLEVVVRQMTRKIKVTDSGDTELLPGTMIDIFDFEEANEKVREFGGEEATGEQALLGITKAALATDSFLSAASFQETTRVLTEAAIKGKTDPLVGLKENVIIGKLIPAGTGMMRYRSVKLDVEEDLTMDDSLLKVE*