ggKbase home page

NECEvent2014_6_7_scaffold_90

Alias: 176_007_scaffold_90

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_7_scaffold_90_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(101..1102)
DNA (1002bp) protein (334aa)
HTH-type transcriptional regulator EbgR n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JMU3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35666.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
regulatory protein, LacI
NECEvent2014_6_7_scaffold_90_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1247..1768)
DNA (522bp) protein (174aa)
putative NADH dehydrogenase/NAD(P)H nitroreductase (EC:1.-.-.-)
Fmn/NADPH-binding flavoprotein n=2 Tax=Clostridium butyricum RepID=M8JLJ4_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35665.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_6_7_scaffold_90_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1792..2283)
DNA (492bp) protein (164aa)
Flavodoxin n=4 Tax=Clostridium butyricum RepID=B1QWE5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83775.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
floX; flavodoxin FloX
NECEvent2014_6_7_scaffold_90_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2426..3277)
DNA (852bp) protein (284aa)
Agmatinase {ECO:0000313|EMBL:KJZ83769.1}; EC=3.5.3.11 {ECO:0000313|EMBL:KJZ83769.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clo
speB; agmatinase SpeB (EC:3.5.3.11)
Agmatinase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KGB7_CLOBU rbh
NECEvent2014_6_7_scaffold_90_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3332..4477)
DNA (1146bp) protein (382aa)
Carboxynorspermidine decarboxylase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JCD7_CLOBU rbh
Carboxynorspermidine decarboxylase {ECO:0000313|EMBL:EEP53619.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4
carboxynorspermidine decarboxylase
NECEvent2014_6_7_scaffold_90_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4616..5815)
DNA (1200bp) protein (400aa)
saccharopine dehydrogenase (EC:1.5.1.7)
Saccharopine dehydrogenase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JMT8_CLOBU rbh
Saccharopine dehydrogenase {ECO:0000313|EMBL:ETI90945.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
NECEvent2014_6_7_scaffold_90_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5874..6728)
DNA (855bp) protein (285aa)
speE; spermidine synthase SpeE (EC:2.5.1.16)
Spermidine synthase n=3 Tax=Clostridium butyricum RepID=B1QWE1_CLOBU rbh
Polyamine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Putrescine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Spermidine synthase {ECO:0000256|HAMAP-Rule:MF_00198}; TaxID=63
NECEvent2014_6_7_scaffold_90_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6811..8337)
DNA (1527bp) protein (509aa)
Arginine decarboxylase {ECO:0000313|EMBL:KJZ83739.1}; EC=4.1.1.19 {ECO:0000313|EMBL:KJZ83739.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
arginine decarboxylase (EC:4.1.1.19)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ASG3_CLOBU rbh
NECEvent2014_6_7_scaffold_90_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8350..9168)
DNA (819bp) protein (273aa)
speD; S-adenosylmethionine decarboxylase proenzyme (EC:4.1.1.50)
S-adenosylmethionine decarboxylase proenzyme n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AH34_CLOBU rbh
S-adenosylmethionine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00465, ECO:0000256|SAAS:SAAS00039304}; Short=AdoMetDC {ECO:0000256|HAMAP-Rule:MF_00465};; Short=SAMDC {ECO:0000256|HAMAP-Rule:MF
NECEvent2014_6_7_scaffold_90_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9684..10850)
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AUG2_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35657.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
YibE/F family protein
NECEvent2014_6_7_scaffold_90_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10867..12426)
DNA (1560bp) protein (520aa)
Alkaline phosphatase {ECO:0000313|EMBL:KJZ83740.1}; EC=3.1.3.1 {ECO:0000313|EMBL:KJZ83740.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
alkaline phosphatase (EC:3.1.3.1)
Alkaline phosphatase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JMT4_CLOBU rbh
NECEvent2014_6_7_scaffold_90_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12646..13338)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JLI5_CLOBU rbh
Putative HD superfamily hydrolase {ECO:0000313|EMBL:KJZ83752.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C
hypothetical protein
NECEvent2014_6_7_scaffold_90_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13625..14566)
DNA (942bp) protein (314aa)
glucokinase (EC:2.7.1.2)
Glucose kinase n=3 Tax=Clostridium butyricum RepID=B1QWD5_CLOBU rbh
Putative glucokinase {ECO:0000313|EMBL:EEP54205.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E B
NECEvent2014_6_7_scaffold_90_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15053..15580
DNA (528bp) protein (176aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1QWD4_CLOBU rbh
RNA-binding region-containing protein {ECO:0000313|EMBL:EEP53465.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum
RNA-binding region-containing protein (RNP-1)
NECEvent2014_6_7_scaffold_90_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15743..17074
DNA (1332bp) protein (444aa)
Radical SAM domain protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JCC9_CLOBU rbh
Radical SAM domain protein {ECO:0000313|EMBL:EEP53077.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. Bo
radical SAM
NECEvent2014_6_7_scaffold_90_16
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17108..17848
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JMT2_CLOBU rbh
Domain often clustered or fused with uracil-DNA glycosylase {ECO:0000313|EMBL:KJZ91099.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
hypothetical protein
NECEvent2014_6_7_scaffold_90_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17967..19130)
DNA (1164bp) protein (388aa)
Methyl-accepting chemotaxis protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JLI1_CLOBU
Chemotaxis protein {ECO:0000313|EMBL:KHD16483.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
methyl-accepting chemotaxis protein
NECEvent2014_6_7_scaffold_90_18
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19441..20268)
DNA (828bp) protein (276aa)
L-arabinose transport system permease protein AraQ n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K823_CLOBU rbh
N-Acetyl-D-glucosamine ABC transport system, permease protein 2 {ECO:0000313|EMBL:KJZ91106.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
ABC transporter permease
NECEvent2014_6_7_scaffold_90_19
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20288..21220)
DNA (933bp) protein (311aa)
ABC transporter, permease protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KGA5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83965.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
ABC transporter permease
NECEvent2014_6_7_scaffold_90_20
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21310..22587)
DNA (1278bp) protein (426aa)
ABC transporter, substrate-binding protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JCC5_CLOBU rbh
N-Acetyl-D-glucosamine ABC transport system, sugar-binding protein {ECO:0000313|EMBL:KJZ83749.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
ABC transporter substrate-binding protein
NECEvent2014_6_7_scaffold_90_21
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22846..25038)
DNA (2193bp) protein (731aa)
agaR; alpha-galactosidase 1 (EC:3.2.1.22)
Alpha-galactosidase AgaN n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JMS7_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83959.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
NECEvent2014_6_7_scaffold_90_22
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25225..26094
DNA (870bp) protein (290aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JLH5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83731.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
msmR1; Msm operon regulatory protein MsmR
NECEvent2014_6_7_scaffold_90_23
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26169..27584)
DNA (1416bp) protein (472aa)
sucrose phosphorylase (EC:2.4.1.7)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K819_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ95425.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
NECEvent2014_6_7_scaffold_90_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27938..29107
DNA (1170bp) protein (390aa)
Galactokinase {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00025843}; EC=2.7.1.6 {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00015833};; Galactose kinase {ECO:0000256|HAMAP-Rule:M
galK; galactokinase GalK (EC:2.7.1.6)
Galactokinase n=2 Tax=Clostridium butyricum RepID=M8KGA2_CLOBU rbh
NECEvent2014_6_7_scaffold_90_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29166..30155
DNA (990bp) protein (330aa)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EEP52801.1}; EC=5.1.3.2 {ECO:0000313|EMBL:EEP52801.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
UDP-glucose 4-epimerase n=4 Tax=Clostridium butyricum RepID=B1QZE8_CLOBU rbh
UDP-glucose 4-epimerase
NECEvent2014_6_7_scaffold_90_26
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30257..31750
DNA (1494bp) protein (498aa)
Galactose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; Short=Gal-1-P uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571};; EC=2.7.7.12 {ECO:0000256|HAMAP-Rule:MF_00571};; UDP-g
galT; galactose-1-phosphate uridylyltransferase GalT (EC:2.7.7.12)
Galactose-1-phosphate uridylyltransferase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ASD8_CLOBU rbh
NECEvent2014_6_7_scaffold_90_27
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31931..32938
DNA (1008bp) protein (336aa)
Transcriptional regulators of the LacI family n=4 Tax=Clostridium butyricum RepID=B1QZE6_CLOBU rbh
Catabolite control protein A {ECO:0000313|EMBL:KJZ86018.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
alanine racemase
NECEvent2014_6_7_scaffold_90_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33339..34067)
DNA (729bp) protein (243aa)
Beta-glucanase (Endo-beta-1,3-1,4 glucanase)(1,3-1,4-beta-D-glucan 4-glucanohydrolase) (Lichenase) {ECO:0000313|EMBL:EEP52779.1}; EC=3.2.1.73 {ECO:0000313|EMBL:EEP52779.1};; TaxID=632245 species="Bact
bglS; beta-glucanase BglS (EC:3.2.1.73)
Beta-glucanase n=2 Tax=Clostridium butyricum RepID=B1QZE5_CLOBU rbh
NECEvent2014_6_7_scaffold_90_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34395..35813)
DNA (1419bp) protein (473aa)
thiH1; 2-iminoacetate synthase ThiH (EC:4.1.99.19)
Thiamine biosynthesis protein ThiH n=3 Tax=Clostridium butyricum RepID=B1QZE4_CLOBU rbh
[FeFe] hydrogenase H-cluster radical SAM maturase HydG {ECO:0000313|EMBL:ENZ35637.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clos
NECEvent2014_6_7_scaffold_90_30
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35921..36169)
DNA (249bp) protein (83aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=N9Z6Z1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ86151.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
putative iron-only hydrogenase system regulator
Displaying items 1-30 of 63 in total

View Taxonomy