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NECEvent2014_6_7_scaffold_97

Alias: 176_007_scaffold_97

Search features with annotation key words

Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_7_scaffold_97_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

73..1239
DNA (1167bp) protein (389aa)
Alkyldihydroxyacetonephosphate synthase {ECO:0000313|EMBL:KJZ84374.1}; EC=2.5.1.26 {ECO:0000313|EMBL:KJZ84374.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiacea
Metallo-beta-lactamase/flavodoxin n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AL18_CLOBU rbh
Uncharacterized flavoproteins
NECEvent2014_6_7_scaffold_97_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1423..2136)
DNA (714bp) protein (238aa)
Trehalose operon repressor n=2 Tax=Clostridium butyricum RepID=R0A8Q9_CLOBU rbh
Trehalose operon transcriptional repressor {ECO:0000313|EMBL:KJZ84342.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp.
treR; trehalose operon repressor
NECEvent2014_6_7_scaffold_97_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2299..3957)
DNA (1659bp) protein (553aa)
Trehalose-6-phosphate hydrolase {ECO:0000313|EMBL:KJZ84331.1}; EC=3.2.1.93 {ECO:0000313|EMBL:KJZ84331.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clost
treC; alpha,alpha-phosphotrehalase (EC:3.2.1.93)
Alpha,alpha-phosphotrehalase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JEM2_CLOBU rbh
NECEvent2014_6_7_scaffold_97_4
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4095..5507)
DNA (1413bp) protein (471aa)
treP; PTS system trehalose-specific transporter subunit IIBC (EC:2.7.1.69)
Pts system, trehalose-specific iibc component n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JD98_CLOBU rbh
Acetyltransferase {ECO:0000313|EMBL:KJZ89424.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
NECEvent2014_6_7_scaffold_97_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5873..6442)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YYV5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ32806.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_6_7_scaffold_97_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6527..7246)
DNA (720bp) protein (240aa)
Protein kinase domain protein n=2 Tax=Clostridium butyricum RepID=M8K7Z7_CLOBU rbh
Serine/threonine kinase {ECO:0000313|EMBL:KJZ84341.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
serine/threonine protein kinase
NECEvent2014_6_7_scaffold_97_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7277..7945)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J4A6_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI87490.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
subtilisin-like serine protease
NECEvent2014_6_7_scaffold_97_8
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8192..8809
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JEL7_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ89410.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
NECEvent2014_6_7_scaffold_97_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9004..10968)
DNA (1965bp) protein (655aa)
Multi-sensor signal transduction histidine kinase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JD94_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ84321.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
sensory transduction histidine kinase
NECEvent2014_6_7_scaffold_97_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11172..11738)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AH20_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ84339.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NECEvent2014_6_7_scaffold_97_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11913..12668)
DNA (756bp) protein (252aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029496};; GlcN6P deaminase {ECO
nagB; glucosamine-6-phosphate deaminase NagB (EC:3.5.99.6)
Glucosamine-6-phosphate deaminase n=4 Tax=Clostridium butyricum RepID=B1QUJ6_CLOBU rbh
NECEvent2014_6_7_scaffold_97_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12936..13658
DNA (723bp) protein (241aa)
Transcriptional regulator, RpiR family n=4 Tax=Clostridium butyricum RepID=C4ICI5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ32071.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
transcriptional regulator, RpiR family
NECEvent2014_6_7_scaffold_97_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13717..14379)
DNA (663bp) protein (221aa)
Putative membrane protein n=2 Tax=Clostridium butyricum RepID=B1QUJ8_CLOBU rbh
Putative membrane-spanning protein {ECO:0000313|EMBL:KJZ84318.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125
hypothetical protein
NECEvent2014_6_7_scaffold_97_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14532..15197
DNA (666bp) protein (222aa)
Cyclic nucleotide-binding protein n=2 Tax=Clostridium butyricum RepID=M8JD89_CLOBU rbh
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:KJZ84380.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp.
CRP (cyclic AMP receptor protein) regulatory protein
NECEvent2014_6_7_scaffold_97_15
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15277..16089
DNA (813bp) protein (271aa)
Exonuclease, RNase T and DNA polymerase III n=2 Tax=Clostridium butyricum RepID=B1QUK0_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ97533.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
exonuclease
NECEvent2014_6_7_scaffold_97_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16241..17749)
DNA (1509bp) protein (503aa)
UPF0371 protein CBDKU1_35280 n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K7Y7_CLOBU rbh
UPF0371 protein ClosIBUN125C_CONTIG63g03402 {ECO:0000256|HAMAP-Rule:MF_01567}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridiu
hypothetical protein
NECEvent2014_6_7_scaffold_97_17
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17966..20254)
DNA (2289bp) protein (763aa)
Diguanylate cyclase/phosphodiesterase n=2 Tax=Clostridium butyricum RepID=B1QUK2_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ97524.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase
NECEvent2014_6_7_scaffold_97_18
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20420..21343)
DNA (924bp) protein (308aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Cl
2-dehydropantoate 2-reductase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JEK9_CLOBU rbh
2-dehydropantoate 2-reductase
NECEvent2014_6_7_scaffold_97_19
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21560..22441
DNA (882bp) protein (294aa)
Transcriptional regulator, LysR family n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JD84_CLOBU rbh
Cys regulon transcriptional activator CysB {ECO:0000313|EMBL:KJZ84373.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp.
LysR family transcriptional regulator
NECEvent2014_6_7_scaffold_97_20
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22506..23297)
DNA (792bp) protein (264aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00031177}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00108586};; TaxID=1523156 species="
tryptophan synthase, alpha chain (EC:4.2.1.20)
Tryptophan synthase alpha chain n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JZW5_CLOBU rbh
NECEvent2014_6_7_scaffold_97_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23290..24477)
DNA (1188bp) protein (396aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
tryptophan synthase, beta chain (EC:4.2.1.20)
Tryptophan synthase beta chain n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YXD3_CLOBU rbh
NECEvent2014_6_7_scaffold_97_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24603..25544
DNA (942bp) protein (314aa)
UPI0003D63FB0 related cluster n=1 Tax=unknown RepID=UPI0003D63FB0 rbh
Deoxyribonucleoside regulator {ECO:0000313|EMBL:ETI87505.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1
transcriptional regulator with sigma factor-related N-terminal domain
NECEvent2014_6_7_scaffold_97_23
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25648..27165)
DNA (1518bp) protein (506aa)
UPI0003D5E9D5 related cluster n=1 Tax=unknown RepID=UPI0003D5E9D5 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ97150.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
dihydropyrimidine dehydrogenase
NECEvent2014_6_7_scaffold_97_24
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27265..28686)
DNA (1422bp) protein (474aa)
D-hydantoinase (EC:3.5.2.2)
UPI0003D66E6D related cluster n=1 Tax=unknown RepID=UPI0003D66E6D rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ97151.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
NECEvent2014_6_7_scaffold_97_25
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28741..29808)
DNA (1068bp) protein (356aa)
UPI0003A91748 related cluster n=1 Tax=unknown RepID=UPI0003A91748 rbh
Pyrimidine ABC transporter, substrate-binding component {ECO:0000313|EMBL:KJZ88570.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Cl
NMT1/THI5-like protein
NECEvent2014_6_7_scaffold_97_26
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29899..30669)
DNA (771bp) protein (257aa)
Beta-ureidopropionase {ECO:0000313|EMBL:KJZ87123.1}; EC=3.5.1.6 {ECO:0000313|EMBL:KJZ87123.1};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s
UPI0003D59468 related cluster n=1 Tax=unknown RepID=UPI0003D59468 rbh
binding-protein-dependent transport systems inner membrane component
NECEvent2014_6_7_scaffold_97_27
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30685..31461)
DNA (777bp) protein (259aa)
UPI0003D69531 related cluster n=1 Tax=unknown RepID=UPI0003D69531 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ87119.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
binding-protein-dependent transport system inner membrane protein
NECEvent2014_6_7_scaffold_97_28
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31464..32363)
DNA (900bp) protein (300aa)
UPI0003D5DADF related cluster n=1 Tax=unknown RepID=UPI0003D5DADF rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ88581.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
ABC transporter related protein
NECEvent2014_6_7_scaffold_97_29
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32481..33743)
DNA (1263bp) protein (421aa)
Beta-ureidopropionase {ECO:0000313|EMBL:KJZ84336.1}; EC=3.5.1.6 {ECO:0000313|EMBL:KJZ84336.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s
amidase, hydantoinase/carbamoylase family (EC:3.5.1.87)
UPI0003D5ECED related cluster n=1 Tax=unknown RepID=UPI0003D5ECED rbh
NECEvent2014_6_7_scaffold_97_30
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34049..35230)
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AIW9_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ84337.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
cyclopropane-fatty-acyl-phospholipid synthase
Displaying items 1-30 of 69 in total

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