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NECEvent2014_6_7_scaffold_335

Alias: 176_007_scaffold_335

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_7_scaffold_335_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..795)
DNA (795bp) protein (265aa)
nifV-ALPHA: homocitrate synthase subunit alpha (EC:2.3.3.14)
Homocitrate synthase 1 n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K0D6_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ32188.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_6_7_scaffold_335_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(770..1717)
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AHG7_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ32189.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
isopropylmalate/homocitrate/citramalate synthase-like protein
NECEvent2014_6_7_scaffold_335_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1714..2484)
DNA (771bp) protein (257aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridi
UPI0003D63C68 related cluster n=1 Tax=unknown RepID=UPI0003D63C68 rbh
peptidil-prolyl cis-trans isomerase
NECEvent2014_6_7_scaffold_335_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2486..5152)
DNA (2667bp) protein (889aa)
Nitrogenase cofactor biosynthesis protein NifB n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YX77_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ84097.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NifN-B
NECEvent2014_6_7_scaffold_335_5
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5167..6504)
DNA (1338bp) protein (446aa)
Nitrogenase MoFe cofactor biosynthesis protein NifE n=2 Tax=Clostridium butyricum RepID=M8JDN7_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ94078.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
nifE; Nitrogenase iron-molybdenum cofactor biosynthesis protein NifE
NECEvent2014_6_7_scaffold_335_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6695..8059)
DNA (1365bp) protein (455aa)
nifK; Nitrogenase molybdenum-iron protein beta chain (EC:1.18.6.1)
Nitrogenase molybdenum-iron protein beta chain n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A709_CLOBU rbh
Nitrogenase molybdenum-iron protein beta chain {ECO:0000313|EMBL:ENZ32193.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
NECEvent2014_6_7_scaffold_335_7
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8065..9654)
DNA (1590bp) protein (530aa)
Nitrogenase protein alpha chain {ECO:0000256|RuleBase:RU004022}; EC=1.18.6.1 {ECO:0000256|RuleBase:RU004022};; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; C
nifD; Nitrogenase molybdenum-iron protein alpha chain (EC:1.18.6.1)
Nitrogenase protein alpha chain n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AHH2_CLOBU rbh
NECEvent2014_6_7_scaffold_335_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9673..10053)
DNA (381bp) protein (127aa)
Nitrogen regulatory protein P-II n=3 Tax=Clostridium butyricum RepID=B1QUW2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ32195.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
nitrogen regulatory protein P-II
NECEvent2014_6_7_scaffold_335_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10076..10399)
DNA (324bp) protein (108aa)
Nitrogen regulatory protein P-II n=4 Tax=Clostridium butyricum RepID=B1QUW3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ32196.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
nitrogen regulatory protein P-II
NECEvent2014_6_7_scaffold_335_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10424..11245)
DNA (822bp) protein (274aa)
Nitrogenase iron protein {ECO:0000256|HAMAP-Rule:MF_00533}; EC=1.18.6.1 {ECO:0000256|HAMAP-Rule:MF_00533};; Nitrogenase Fe protein {ECO:0000256|HAMAP-Rule:MF_00533}; Nitrogenase component II {ECO:0000
Nitrogenase iron protein n=3 Tax=Clostridium butyricum RepID=C4IC62_CLOBU rbh
nitrogenase iron protein
NECEvent2014_6_7_scaffold_335_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11560..12540)
DNA (981bp) protein (327aa)
Molybdate-binding protein n=2 Tax=Clostridium butyricum RepID=B1QU16_CLOBU rbh
Molybdate-binding protein {ECO:0000313|EMBL:KHD14040.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
molybdate-binding protein rbh
NECEvent2014_6_7_scaffold_335_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12537..13460)
DNA (924bp) protein (308aa)
UPI0003D5E2C0 related cluster n=1 Tax=unknown RepID=UPI0003D5E2C0 rbh
Uncharacterized protein {ECO:0000313|EMBL:KHD14039.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hypothetical protein
NECEvent2014_6_7_scaffold_335_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13465..14082)
DNA (618bp) protein (206aa)
UPI0003D61A4C related cluster n=1 Tax=unknown RepID=UPI0003D61A4C rbh
Iron only nitrogenase protein AnfO {ECO:0000313|EMBL:ETI87620.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum D
hypothetical protein
NECEvent2014_6_7_scaffold_335_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14392..15198
DNA (807bp) protein (269aa)
Molybdate ABC transporter, periplasmic molybdate-binding protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YX84_CLOBU rbh
Molybdate ABC transporter, periplasmic molybdate-binding protein {ECO:0000313|EMBL:ENZ32201.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
modA; molybdate ABC transporter, periplasmic molybdate-binding protein
NECEvent2014_6_7_scaffold_335_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15230..15913
DNA (684bp) protein (228aa)
UPI0003D5CECD related cluster n=1 Tax=unknown RepID=UPI0003D5CECD rbh
Molybdate ABC transporter permease {ECO:0000313|EMBL:KHD14036.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
modB; molybdate ABC transporter, permease protein
NECEvent2014_6_7_scaffold_335_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15915..16964
DNA (1050bp) protein (350aa)
UPI0003D5A2EB related cluster n=1 Tax=unknown RepID=UPI0003D5A2EB rbh
Fe(3+) ions import ATP-binding protein FbpC2 {ECO:0000313|EMBL:ETI87623.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium b
putrescine transport ATP-binding protein PotG
NECEvent2014_6_7_scaffold_335_17
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17044..17457
DNA (414bp) protein (138aa)
Molybdenum-pterin-binding protein n=3 Tax=Clostridium butyricum RepID=B1QU12_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ84220.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
molybdenum-pterin-binding protein
NECEvent2014_6_7_scaffold_335_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18587..19879)
DNA (1293bp) protein (431aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000
eno2; enolase Eno (EC:4.2.1.11)
Enolase n=2 Tax=Clostridium butyricum RepID=B1QU11_CLOBU rbh
NECEvent2014_6_7_scaffold_335_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20085..20855)
DNA (771bp) protein (257aa)
Acetyltransferase, GNAT family n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IC53_CLOBU rbh
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EEP56595.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str
GCN5-related N-acetyltransferase
NECEvent2014_6_7_scaffold_335_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20878..21684)
DNA (807bp) protein (269aa)
Metallo-beta-lactamase family protein n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IC52_CLOBU rbh
Beta-lactamase {ECO:0000313|EMBL:KHD14030.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
metallo-beta-lactamase family protein
NECEvent2014_6_7_scaffold_335_21
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21723..22280)
DNA (558bp) protein (186aa)
GCN5-related N-acetyltransferase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JDM1_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ84133.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
GCN5-like N-acetyltransferase
NECEvent2014_6_7_scaffold_335_22
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22569..22958
DNA (390bp) protein (130aa)
UPI0003D64EAE related cluster n=1 Tax=unknown RepID=UPI0003D64EAE
Uncharacterized protein {ECO:0000313|EMBL:KJZ84202.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_6_7_scaffold_335_23
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23085..24557)
DNA (1473bp) protein (491aa)
UPI0003D664C8 related cluster n=1 Tax=unknown RepID=UPI0003D664C8 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ84149.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
L-fucose isomerase related protein
NECEvent2014_6_7_scaffold_335_24
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24609..25232)
DNA (624bp) protein (208aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1R1H3_CLOBU rbh
Glycosyltransferase {ECO:0000313|EMBL:KJZ94101.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
NECEvent2014_6_7_scaffold_335_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25427..26974)
DNA (1548bp) protein (516aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YX94_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ32216.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Glycoside Hydrolase Family 13 protein
NECEvent2014_6_7_scaffold_335_26
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27103..29439)
DNA (2337bp) protein (779aa)
xghA; Xyloglucanase (EC:3.2.1.155)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AJD3_CLOBU rbh
Secreted cellulase {ECO:0000313|EMBL:KJZ84137.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NECEvent2014_6_7_scaffold_335_27
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29470..30933)
DNA (1464bp) protein (488aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A729_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ84142.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
Displaying 27 items

View Taxonomy