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NECEvent2014_6_7_scaffold_422

Alias: 176_007_scaffold_422

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_7_scaffold_422_1

Not on your lists

comp(2..874)
DNA (873bp) protein (291aa)
Prenyltransferase, UbiA family n=2 Tax=Clostridium butyricum RepID=B1R0B5_CLOBU
Prenyltransferase, UbiA family {ECO:0000313|EMBL:ETJ16647.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
4-hydroxybenzoate polyprenyltransferase and related prenyltransferases
NECEvent2014_6_7_scaffold_422_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(896..2791)
DNA (1896bp) protein (632aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YTS3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ30835.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
membrane protein
NECEvent2014_6_7_scaffold_422_3
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2788..3984)
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G1W2_CLOPA rbh
Uncharacterized protein {ECO:0000313|EMBL:ETD69943.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-59
hypothetical protein
NECEvent2014_6_7_scaffold_422_4
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3968..5164)
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G0A6_CLOPA rbh
Uncharacterized protein {ECO:0000313|EMBL:ETD69944.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-59
hypothetical protein
NECEvent2014_6_7_scaffold_422_5
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5178..6338)
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G0I7_CLOPA rbh
Uncharacterized protein {ECO:0000313|EMBL:ETD69945.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-59
glycosyl transferase family 2
NECEvent2014_6_7_scaffold_422_6
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6354..7607)
DNA (1254bp) protein (418aa)
ABC transporter n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G1I9_CLOPA rbh
ABC transporter {ECO:0000313|EMBL:ETD69946.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
ABC transporter
NECEvent2014_6_7_scaffold_422_7
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7622..8989)
DNA (1368bp) protein (456aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G2R1_CLOPA rbh
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL
ABC-2 type transporter
NECEvent2014_6_7_scaffold_422_8
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9009..10094)
DNA (1086bp) protein (362aa)
mannose-1-phosphate guanylyltransferase (EC:2.7.7.13)
Mannose-1-phosphate guanylyltransferase n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G1X8_CLOPA rbh
Mannose-1-phosphate guanylyltransferase {ECO:0000313|EMBL:ETD69948.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteu
NECEvent2014_6_7_scaffold_422_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10116..10955)
DNA (840bp) protein (280aa)
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:KJZ84797.1}; EC=1.1.1.133 {ECO:0000313|EMBL:KJZ84797.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clo
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JPD6_CLOBU rbh
NECEvent2014_6_7_scaffold_422_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10968..11933)
DNA (966bp) protein (322aa)
Alpha-L-Rha alpha-1,3-L-rhamnosyltransferase {ECO:0000313|EMBL:KJZ84794.1}; EC=2.4.1.- {ECO:0000313|EMBL:KJZ84794.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridi
WsbC n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JN25_CLOBU rbh
glycosyl transferase family protein
NECEvent2014_6_7_scaffold_422_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11920..12939)
DNA (1020bp) protein (340aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
dTDP-glucose 4,6-dehydratase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K9J0_CLOBU rbh
dTDP-glucose 4,6-dehydratase
NECEvent2014_6_7_scaffold_422_12
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12966..13577)
DNA (612bp) protein (204aa)
rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase RfbC (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KHT5_CLOBU rbh
Choline binding protein A {ECO:0000313|EMBL:KJZ97585.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
NECEvent2014_6_7_scaffold_422_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13549..14430)
DNA (882bp) protein (294aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostri
rmlA4; glucose-1-phosphate thymidylyltransferase RmlA (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JDV0_CLOBU rbh
NECEvent2014_6_7_scaffold_422_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14878..16299
DNA (1422bp) protein (474aa)
Undecaprenyl-phosphate glucose phosphotransferase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JPD1_CLOBU rbh
Capsular polysaccharide biosynthesis protein {ECO:0000313|EMBL:KJZ84811.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium s
undecaprenyl-phosphate galactose phosphotransferase
NECEvent2014_6_7_scaffold_422_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16385..16714
DNA (330bp) protein (110aa)
UPI0003D5E62D related cluster n=1 Tax=unknown RepID=UPI0003D5E62D
Uncharacterized protein {ECO:0000313|EMBL:ETI91851.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
NECEvent2014_6_7_scaffold_422_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16742..16891)
DNA (150bp) protein (50aa)
UPI0003D63A4F related cluster n=1 Tax=unknown RepID=UPI0003D63A4F
HEPN protein {ECO:0000313|EMBL:ETI91853.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
HEPN domain-containing protein
NECEvent2014_6_7_scaffold_422_17
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17226..19073
DNA (1848bp) protein (616aa)
O-antigen polymerase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K9I6_CLOBU rbh
WsaB {ECO:0000313|EMBL:KJZ84809.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
O-antigen ligase
NECEvent2014_6_7_scaffold_422_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19229..20830)
DNA (1602bp) protein (534aa)
UPI0003D68F1B related cluster n=1 Tax=unknown RepID=UPI0003D68F1B rbh
Collagenolytic protease {ECO:0000313|EMBL:ETI91857.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
collagenolytic protease
NECEvent2014_6_7_scaffold_422_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21099..22844)
DNA (1746bp) protein (582aa)
UPI0003D5A729 related cluster n=1 Tax=unknown RepID=UPI0003D5A729 rbh
CspD {ECO:0000313|EMBL:ETI91858.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
NECEvent2014_6_7_scaffold_422_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23226..25109)
DNA (1884bp) protein (628aa)
Surface protein PspC n=2 Tax=Clostridium butyricum RepID=B1QWN0_CLOBU rbh
CspC {ECO:0000313|EMBL:EEP55831.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
cell wall binding repeat-containing protein
NECEvent2014_6_7_scaffold_422_21
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25266..25814)
DNA (549bp) protein (183aa)
Lytic amidase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JPC1_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ84803.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
cell wall binding repeat-containing protein
NECEvent2014_6_7_scaffold_422_22
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26005..26232)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YTT4_CLOBU
Choline binding protein A {ECO:0000313|EMBL:KJZ85177.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
cell wall binding repeat-containing protein
Displaying 22 items

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