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NECEvent2014_6_7_scaffold_849

Alias: 176_007_scaffold_849

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_7_scaffold_849_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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88..1356
DNA (1269bp) protein (423aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=N9YVG9_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ31440.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
ISCpe5, transposase
NECEvent2014_6_7_scaffold_849_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1468..2394
DNA (927bp) protein (309aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1523154 species="Ba
pyrB; aspartate carbamoyltransferase PyrB (EC:2.1.3.2)
Aspartate carbamoyltransferase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JH98_CLOBU rbh
NECEvent2014_6_7_scaffold_849_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2395..2817
DNA (423bp) protein (141aa)
Aspartate carbamoyltransferase regulatory chain n=4 Tax=Clostridium butyricum RepID=B1QTS0_CLOBU
Aspartate carbamoyltransferase regulatory chain (PyrI) {ECO:0000313|EMBL:KJZ83185.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clo
aspartate carbamoyltransferase regulatory subunit
NECEvent2014_6_7_scaffold_849_4
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2969..4168
DNA (1200bp) protein (400aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS0008
pyrC; dihydroorotase PyrC (EC:3.5.2.3)
Dihydroorotase n=2 Tax=Clostridium butyricum RepID=M8KC59_CLOBU rbh
NECEvent2014_6_7_scaffold_849_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4210..5082
DNA (873bp) protein (291aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032256}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032220};; OMP decarboxylase
pyrF; orotidine 5'-phosphate decarboxylase PyrF (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase n=4 Tax=Clostridium butyricum RepID=B1QTR8_CLOBU rbh
NECEvent2014_6_7_scaffold_849_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5275..6018
DNA (744bp) protein (248aa)
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit n=2 Tax=Clostridium butyricum RepID=M8JIP9_CLOBU rbh
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; Dihydroorotate oxidase B, electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; TaxID=15231
pyrK; dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit
NECEvent2014_6_7_scaffold_849_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6038..6934
DNA (897bp) protein (299aa)
pyrD; dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit (EC:1.3.1.14)
Dihydroorotate dehydrogenase n=4 Tax=Clostridium butyricum RepID=B1QTR6_CLOBU rbh
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule
NECEvent2014_6_7_scaffold_849_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6968..7642
DNA (675bp) protein (225aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=
pyrE; orotate phosphoribosyltransferase PyrE (EC:2.4.2.10)
Orotate phosphoribosyltransferase n=4 Tax=Clostridium butyricum RepID=B1QTR5_CLOBU rbh
NECEvent2014_6_7_scaffold_849_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8314..10545
DNA (2232bp) protein (744aa)
pflB; formate acetyltransferase (EC:2.3.1.54)
Formate acetyltransferase n=4 Tax=Clostridium butyricum RepID=B1QTR4_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83131.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NECEvent2014_6_7_scaffold_849_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10759..11469
DNA (711bp) protein (237aa)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridi
Pyruvate formate-lyase 1-activating enzyme n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J889_CLOBU rbh
pyruvate formate-lyase activating enzyme
NECEvent2014_6_7_scaffold_849_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11836..12453)
DNA (618bp) protein (206aa)
Exonuclease n=4 Tax=Clostridium butyricum RepID=B1QTR1_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35843.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
exonuclease, RNase T and DNA polymerase III
NECEvent2014_6_7_scaffold_849_12
unknown

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comp(12472..12630)
DNA (159bp) protein (53aa)

This feature has no annotations

Displaying 12 items

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