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NECEvent2014_7_1_scaffold_160

Alias: 177_001_scaffold_160

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_7_1_scaffold_160_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..495
DNA (495bp) protein (165aa)
Transcriptional regulator, LytR family n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XZ87_BIFBU
Transcriptional regulator, LytR family
Transcriptional regulator, LytR family {ECO:0000313|EMBL:ABE96467.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium
NECEvent2014_7_1_scaffold_160_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

770..2629
DNA (1860bp) protein (620aa)
Glycosyl hydrolases family 25,lysozyme {ECO:0000313|EMBL:ABE96466.1}; EC=3.2.1.17 {ECO:0000313|EMBL:ABE96466.1};; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae;
lytC; Glycosyl hydrolases family 25,lysozyme (EC:3.2.1.17)
Glycosyl hydrolases family 25,lysozyme n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XZ86_BIFBU rbh
NECEvent2014_7_1_scaffold_160_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2670..3611)
DNA (942bp) protein (314aa)
Glycosyltransferase involved in cell wall biogenesis (EC:2.4.-.-)
Glycosyltransferase involved in cell wall biogenesis {ECO:0000313|EMBL:ABE96465.1}; EC=2.4.-.- {ECO:0000313|EMBL:ABE96465.1};; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifido
Glycosyltransferase involved in cell wall biogenesis n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XZ85_BIFBU rbh
NECEvent2014_7_1_scaffold_160_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3666..5870
DNA (2205bp) protein (735aa)
Putative membrane protein n=2 Tax=Bifidobacterium RepID=I3AW08_BIFLN rbh
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ72011.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum
NECEvent2014_7_1_scaffold_160_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5920..6942
DNA (1023bp) protein (341aa)
rmlB; dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifid
dTDP-glucose 4,6-dehydratase n=2 Tax=Bifidobacterium breve RepID=F9XZ83_BIFBU rbh
NECEvent2014_7_1_scaffold_160_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6950..8401
DNA (1452bp) protein (484aa)
rmlC_rmlD; dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase (EC:5.1.3.13 1.1.1.113)
dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:ABE96462.1}; EC=1.1.1.113 {ECO:0000313|EMBL:ABE96462.1};; EC=5.1.3.13 {ECO:0000313|EMBL:ABE96462.1};; TaxID=3264
dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XZ82_BIFBU rbh
NECEvent2014_7_1_scaffold_160_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8542..9438
DNA (897bp) protein (299aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacter
Glucose-1-phosphate thymidylyltransferase n=2 Tax=Bifidobacterium RepID=E8MW64_BIFL1 rbh
glucose-1-phosphate thymidylyltransferase
NECEvent2014_7_1_scaffold_160_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9451..10770
DNA (1320bp) protein (440aa)
Glycosyltransferase (EC:2.4.1.-) rbh
Glycosyltransferase {ECO:0000313|EMBL:ABE96460.1}; EC=2.4.1.- {ECO:0000313|EMBL:ABE96460.1};; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;"
Glycosyltransferase n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XZ80_BIFBU rbh
NECEvent2014_7_1_scaffold_160_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10808..12808
DNA (2001bp) protein (667aa)
Alpha-L-Rha alpha-1,2-L-rhamnosyltransferase/alpha-L-Rha alpha-1,3-L-rhamnosyltransferase {ECO:0000313|EMBL:ABE96459.1}; EC=2.4.1.- {ECO:0000313|EMBL:ABE96459.1};; TaxID=326426 species="Bacteria; Acti
Alpha-L-Rha alpha-1,2-L-rhamnosyltransferase/alpha-L-Rha alpha-1,3-L-rhamnosyltransferase (EC:2.4.1.-)
Alpha-L-Rha alpha-1,2-L-rhamnosyltransferase/alpha-L-Rha alpha-1,3-L-rhamnosyltransferase n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XZ79_BIFBU rbh
NECEvent2014_7_1_scaffold_160_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12839..13663
DNA (825bp) protein (275aa)
ABC-type polysaccharide/polyol phosphate export systems permease component n=5 Tax=Bifidobacterium PF9_BIFLD">RepID=B3DPF9_BIFLD rbh
ABC-type polysaccharide/polyol phosphate export systems, permease component
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (str
NECEvent2014_7_1_scaffold_160_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13663..14931
DNA (1269bp) protein (423aa)
ABC-type polysaccharide/polyol phosphate transport system, ATPase component n=2 Tax=Bifidobacterium RepID=D6DCH4_BIFLN rbh
ABC-type polysaccharide/polyol phosphate transport system, ATPase component rbh
ABC-type polysaccharide/polyol phosphate transport system, ATPase component {ECO:0000313|EMBL:CBK70195.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifido
NECEvent2014_7_1_scaffold_160_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14956..16479
DNA (1524bp) protein (508aa)
Glycosyltransferase (EC:2.4.1.-) rbh
Glycosyltransferase {ECO:0000313|EMBL:ABE96456.1}; EC=2.4.1.- {ECO:0000313|EMBL:ABE96456.1};; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;"
Glycosyltransferase n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XZ76_BIFBU rbh
NECEvent2014_7_1_scaffold_160_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16506..18800)
DNA (2295bp) protein (765aa)
Phosphoglycerol transferase n=2 Tax=Bifidobacterium RepID=F9XZ75_BIFBU rbh
Phosphoglycerol transferase rbh
Phosphoglycerol transferase {ECO:0000313|EMBL:ABE96455.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (stra
NECEvent2014_7_1_scaffold_160_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18878..21130)
DNA (2253bp) protein (751aa)
Phosphoglycerol transferase n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XZ74_BIFBU rbh
Phosphoglycerol transferase rbh
Phosphoglycerol transferase {ECO:0000313|EMBL:ABE96454.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (stra
NECEvent2014_7_1_scaffold_160_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21275..22627
DNA (1353bp) protein (451aa)
Conserved hypothetical membrane spanning protein n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XZ73_BIFBU rbh
Conserved hypothetical membrane spanning protein
Conserved hypothetical membrane spanning protein {ECO:0000313|EMBL:ABE96453.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifido
NECEvent2014_7_1_scaffold_160_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22658..23707)
DNA (1050bp) protein (350aa)
Glycosyltransferase involved in cell wall biogenesis (EC:2.4.-.-) rbh
Glycosyltransferase involved in cell wall biogenesis {ECO:0000313|EMBL:ABE96452.1}; EC=2.4.-.- {ECO:0000313|EMBL:ABE96452.1};; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifido
Glycosyltransferase involved in cell wall biogenesis n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XZ72_BIFBU rbh
NECEvent2014_7_1_scaffold_160_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24512..25690
DNA (1179bp) protein (393aa)
gif; UDP-galactopyranose mutase (EC:5.4.99.9)
UDP-galactopyranose mutase {ECO:0000313|EMBL:ABE96451.1}; EC=5.4.99.9 {ECO:0000313|EMBL:ABE96451.1};; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacte
UDP-galactopyranose mutase n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XZ71_BIFBU rbh
NECEvent2014_7_1_scaffold_160_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25798..26733)
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Bifidobacterium breve RepID=UPI00036DB47A rbh
putative secreted protein rbh
Hypothetical secreted protein {ECO:0000313|EMBL:ABE96450.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (st
NECEvent2014_7_1_scaffold_160_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26886..27266
DNA (381bp) protein (127aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=F6C8F1_BIFBA
putative membrane spanning protein
Conserved hypothetical membrane spanning protein {ECO:0000313|EMBL:ABE96449.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifido
Displaying 19 items

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