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NECEvent2014_7_1_scaffold_175

Alias: 177_001_scaffold_175

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_7_1_scaffold_175_1
unknown

Not on your lists

comp(1..66)
DNA (66bp) protein (22aa)

This feature has no annotations

NECEvent2014_7_1_scaffold_175_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

347..1006
DNA (660bp) protein (220aa)
Translocator protein, LysE family n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CU16_BIFBR rbh
Lysine exporter protein
Translocator protein, LysE family {ECO:0000313|EMBL:ERI88050.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium brev
NECEvent2014_7_1_scaffold_175_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(990..2534)
DNA (1545bp) protein (515aa)
PAP2 family protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E6H3_BIFBR rbh
PAP2 family protein {ECO:0000313|EMBL:ERI88051.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Conserved hypothetical secreted protein, possible acid phosphatase rbh
NECEvent2014_7_1_scaffold_175_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2630..3730)
DNA (1101bp) protein (367aa)
ABC transporter, permease protein n=3 Tax=Bifidobacterium breve RepID=F6C863_BIFBA rbh
Glutamate transport system permease protein gluD rbh
Glutamate transport system permease protein gluD {ECO:0000313|EMBL:AHJ21510.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifid
NECEvent2014_7_1_scaffold_175_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3736..4413)
DNA (678bp) protein (226aa)
Glutamate transport system permease protein gluC n=5 Tax=Bifidobacterium breve RepID=F9Y255_BIFBU rbh
Glutamate transport system permease protein gluC
Glutamate transport system permease protein gluC {ECO:0000313|EMBL:ABE96017.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifido
NECEvent2014_7_1_scaffold_175_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4413..5213)
DNA (801bp) protein (267aa)
ABC transporter, substrate-binding protein, family 3 n=3 Tax=Bifidobacterium breve RepID=F6C861_BIFBA rbh
ABC transporter, substrate-binding protein, family 3 {ECO:0000313|EMBL:EFE88823.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bi
Glutamate-binding protein gluB rbh
NECEvent2014_7_1_scaffold_175_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5271..6134)
DNA (864bp) protein (288aa)
Glutamate ABC transporter, ATP-binding protein GluA n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CU22_BIFBR rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFE88822.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium br
Glutamate transport ATP-binding protein gluA
NECEvent2014_7_1_scaffold_175_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6166..6717)
DNA (552bp) protein (184aa)
YbaK/proline--tRNA ligase associated domain protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E6H8_BIFBR rbh
YbaK/proline--tRNA ligase associated domain protein {ECO:0000313|EMBL:ERI88056.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bi
Hypothetical protein with YbaK / prolyl-tRNA synthetases associated domain rbh
NECEvent2014_7_1_scaffold_175_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(6921..8720)
DNA (1800bp) protein (600aa)
aspS; Aspartyl-tRNA synthetase (EC:6.1.1.12) rbh
Aspartate--tRNA ligase n=6 Tax=Bifidobacterium breve RepID=F6C858_BIFBA rbh
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:EPD75686.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326
NECEvent2014_7_1_scaffold_175_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(8756..10219)
DNA (1464bp) protein (488aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:00
Histidine--tRNA ligase n=4 Tax=Bifidobacterium breve RepID=F6C857_BIFBA rbh
Histidyl-tRNA synthetase rbh
NECEvent2014_7_1_scaffold_175_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10247..11692
DNA (1446bp) protein (482aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CU28_BIFBR rbh
Uncharacterized protein {ECO:0000313|EMBL:ERI88060.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.
Hypothetical protein with DUF349 domain
NECEvent2014_7_1_scaffold_175_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11853..13787)
DNA (1935bp) protein (645aa)
5'-nucleotidase protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E6I3_BIFBR rbh
5'-nucleotidase protein {ECO:0000313|EMBL:ERI88061.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.
Calcineurin-like phosphoesterase
NECEvent2014_7_1_scaffold_175_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13861..14940)
DNA (1080bp) protein (360aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=F6C854_BIFBA rbh
Esterase/lipase-like protein
Uncharacterized protein {ECO:0000313|EMBL:AEF26948.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain A
NECEvent2014_7_1_scaffold_175_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14940..16364)
DNA (1425bp) protein (475aa)
MFS transporter, SP family n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CVH7_BIFBR rbh
MFS transporter, SP family {ECO:0000313|EMBL:ERI88063.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP74
Glucose/fructose transport protein
NECEvent2014_7_1_scaffold_175_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16551..17420)
DNA (870bp) protein (290aa)
Transcriptional regulator, AraC family n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CC38_BIFBR rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ERI88064.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium
Transcriptional regulator, AraC family
NECEvent2014_7_1_scaffold_175_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17570..20161)
DNA (2592bp) protein (864aa)
Hemolysin B n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E6I8_BIFBR rbh
Hemolysin B {ECO:0000313|EMBL:ERI88066.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Negative regulator of genetic competence clpC/mecB
NECEvent2014_7_1_scaffold_175_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20314..21279
DNA (966bp) protein (322aa)
Universal stress protein family n=5 Tax=Bifidobacterium breve RepID=F9Y268_BIFBU rbh
Universal stress protein family rbh
Universal stress family protein {ECO:0000313|EMBL:AEF27464.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (
NECEvent2014_7_1_scaffold_175_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21431..22480)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=5 Tax=Bifidobacterium breve RepID=F6C7X4_BIFBA rbh
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERI88068.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.
NECEvent2014_7_1_scaffold_175_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22489..22878)
DNA (390bp) protein (130aa)
Cold-shock DNA-binding domain protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CC43_BIFBR
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:ERI88069.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium
cold-shock protein
NECEvent2014_7_1_scaffold_175_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22972..24963)
DNA (1992bp) protein (664aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Bifidobacterium breve RepID=U2CU41_BIFBR rbh
Two component system histidine kinase
NECEvent2014_7_1_scaffold_175_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24974..25549)
DNA (576bp) protein (192aa)
Response regulator receiver domain protein n=5 Tax=Bifidobacterium breve RepID=F6C7X1_BIFBA rbh
Two-component response regulator
Two-component response regulator {ECO:0000313|EMBL:ABE96034.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve
Displaying 21 items

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