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NECEvent2014_7_1_scaffold_229

Alias: 177_001_scaffold_229

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_7_1_scaffold_229_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..897
DNA (897bp) protein (299aa)
thrA; Homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobac
Homoserine dehydrogenase n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XYV8_BIFBU rbh
NECEvent2014_7_1_scaffold_229_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

992..2146
DNA (1155bp) protein (385aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|
Homoserine kinase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E3V8_BIFBR rbh
Homoserine kinase
NECEvent2014_7_1_scaffold_229_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2298..3749
DNA (1452bp) protein (484aa)
Maf-like protein n=3 Tax=Bifidobacterium breve RepID=F6C842_BIFBA rbh
putative septum formation protein Maf
Maf-like/Nudix hydrolase fusion protein {ECO:0000313|EMBL:EPD76091.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacteriu
NECEvent2014_7_1_scaffold_229_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3812..4321)
DNA (510bp) protein (170aa)
Toxin-antitoxin system, toxin component, GNAT family n=5 Tax=Bifidobacterium breve RepID=F6C841_BIFBA rbh
Acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:AHJ21943.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
NECEvent2014_7_1_scaffold_229_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4312..4647)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3AIB1_BIFBR
Hypothetical protein
Toxin-antitoxin system protein {ECO:0000313|EMBL:AHJ21942.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve N
NECEvent2014_7_1_scaffold_229_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4913..5773
DNA (861bp) protein (287aa)
ATP-binding protein of ABC transporter system n=3 Tax=Bifidobacterium breve RepID=F9XYV4_BIFBU rbh
ATP-binding protein of ABC transporter system
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERI87050.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium b
NECEvent2014_7_1_scaffold_229_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5770..7218
DNA (1449bp) protein (483aa)
ABC transporter permease n=1 Tax=Bifidobacterium breve RepID=UPI0002EA99C2 rbh
Transporter rbh
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EFE88432.1}; Putative transport protein {ECO:0000313|EMBL:BAR00786.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bif
NECEvent2014_7_1_scaffold_229_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7200..8228)
DNA (1029bp) protein (343aa)
Sugar-binding domain protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2DZ86_BIFBR rbh
Transcriptional regulator, LacI family rbh
Transcriptional regulator, LacI family {ECO:0000313|EMBL:AHJ21939.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium
NECEvent2014_7_1_scaffold_229_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8440..9723
DNA (1284bp) protein (428aa)
Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein n=5 Tax=Bifidobacterium breve RepID=F6C836_BIFBA rbh
Mandelate racemase
Uncharacterized protein {ECO:0000313|EMBL:EPD76085.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.
NECEvent2014_7_1_scaffold_229_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9864..10655
DNA (792bp) protein (264aa)
Short chain dehydrogenase n=7 Tax=Bifidobacterium RepID=F9XYV0_BIFBU rbh
Short chain dehydrogenase
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EFE88435.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium
NECEvent2014_7_1_scaffold_229_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10845..12107
DNA (1263bp) protein (421aa)
Major facilitator superfamily MFS_1 n=5 Tax=Bifidobacterium RepID=D6ZWK1_BIFLJ rbh
transporter, member of MFS, possible L-fucose permease
Transporter, member of MFS, possible L-fucose permease {ECO:0000313|EMBL:AHJ21936.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source=
NECEvent2014_7_1_scaffold_229_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12109..12876
DNA (768bp) protein (256aa)
Amidohydrolase family protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2DZ91_BIFBR rbh
Hypothetical protein
Amidohydrolase family protein {ECO:0000313|EMBL:ERI87057.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JC
NECEvent2014_7_1_scaffold_229_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12987..13880
DNA (894bp) protein (298aa)
Dihydrodipicolinate synthase n=5 Tax=Bifidobacterium breve RepID=F9XYU7_BIFBU rbh
Dihydrodipicolinate synthase
Putative dihydrodipicolinate synthase {ECO:0000313|EMBL:AEF26658.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium b
NECEvent2014_7_1_scaffold_229_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13956..14900)
DNA (945bp) protein (315aa)
Transporter, auxin efflux carrier (AEC) family protein n=5 Tax=Bifidobacterium breve RepID=F6C831_BIFBA rbh
Transporter
Transporter, auxin efflux carrier (AEC) family protein {ECO:0000313|EMBL:EFE88440.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="
NECEvent2014_7_1_scaffold_229_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15006..16211
DNA (1206bp) protein (402aa)
Succinyl-diaminopimelate desuccinylase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CR99_BIFBR rbh
Succinyl-diaminopimelate desuccinylase {ECO:0000313|EMBL:ERI87060.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium
Succinyl-diaminopimelate desuccinylase
NECEvent2014_7_1_scaffold_229_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16630..19716
DNA (3087bp) protein (1029aa)
Rne/Rng family ribonuclease n=2 Tax=Bifidobacterium breve RepID=S2ZH31_BIFBR rbh
Ribonuclease G rbh
Rne/Rng family ribonuclease {ECO:0000313|EMBL:EPD76078.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0
NECEvent2014_7_1_scaffold_229_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


19903..20211
DNA (309bp) protein (103aa)
50S ribosomal protein L21 n=6 Tax=Bifidobacterium breve RepID=F6C828_BIFBA
LSU ribosomal protein L21P
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" so
NECEvent2014_7_1_scaffold_229_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


20234..20485
DNA (252bp) protein (84aa)
50S ribosomal protein L27 n=5 Tax=Bifidobacterium breve RepID=F6C827_BIFBA
LSU ribosomal protein L27P
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NC
NECEvent2014_7_1_scaffold_229_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20552..21796
DNA (1245bp) protein (415aa)
GTPase Obg n=3 Tax=Bifidobacterium breve RepID=F6C826_BIFBA rbh
GTP-binding protein, GTP1/OBG family
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidob
Displaying 19 items

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