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NECEvent2014_7_1_scaffold_42

Alias: 177_001_scaffold_42

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_7_1_scaffold_42_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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62..616
DNA (555bp) protein (185aa)
nuoJ; NADH:ubiquinone oxidoreductase subunit J (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit J n=1390 Tax=Enterobacteriaceae RepID=NUOJ_ECO57 rbh
NADH-quinone oxidoreductase, J subunit {ECO:0000313|EMBL:EGU97006.1}; TaxID=796392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source=
NECEvent2014_7_1_scaffold_42_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

613..915
DNA (303bp) protein (101aa)
NADH-quinone oxidoreductase subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01456};; NADH dehydrogenase I subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; NDH-1 subunit
NADH-quinone oxidoreductase subunit K n=1405 Tax=Enterobacteriaceae RepID=NUOK_CITK8
nuoK; NADH dehydrogenase subunit K
NECEvent2014_7_1_scaffold_42_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

912..2753
DNA (1842bp) protein (614aa)
nuoL; NADH dehydrogenase subunit L (EC:1.6.5.3)
Proton-translocating NADH-quinone oxidoreductase, chain L n=47 Tax=Escherichia RepID=B1IXR4_ECOLC rbh
NADH-quinone oxidoreductase subunit L {ECO:0000313|EMBL:ELC07664.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source=
NECEvent2014_7_1_scaffold_42_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2917..4446
DNA (1530bp) protein (510aa)
NADH-quinone oxidoreductase subunit M {ECO:0000313|EMBL:KDZ41801.1}; EC=1.6.99.5 {ECO:0000313|EMBL:KDZ41801.1};; TaxID=1444137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales
NADH-quinone oxidoreductase subunit M n=758 Tax=Enterobacteriaceae RepID=NUOM_ECO57 rbh
NADH dehydrogenase subunit M rbh
NECEvent2014_7_1_scaffold_42_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4453..5910
DNA (1458bp) protein (486aa)
NADH dehydrogenase subunit N (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_00445};; NADH dehydrogenase I subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; NDH-1 subunit
NADH-quinone oxidoreductase subunit N n=11 Tax=Escherichia coli RepID=NUON_ECOLC rbh
NECEvent2014_7_1_scaffold_42_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5977..6480)
DNA (504bp) protein (168aa)
Uncharacterized protein n=428 Tax=Enterobacteriaceae RepID=J7R6M8_ECOLX rbh
hypothetical protein rbh
Protein yfbM {ECO:0000313|EMBL:ELE43167.1}; TaxID=1182673 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE66.;
NECEvent2014_7_1_scaffold_42_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6583..6915)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Escherichia coli AD30 RepID=K5C5E3_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGP24147.1}; TaxID=1001989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_7_1_scaffold_42_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7843..8838)
DNA (996bp) protein (332aa)
Protease elaD {ECO:0000313|EMBL:EZK03810.1}; EC=3.4.22.- {ECO:0000313|EMBL:EZK03810.1};; TaxID=1444134 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Es
Protease elaD n=8 Tax=Escherichia coli RepID=T6MYY0_ECOLX rbh
deubiquitinase
NECEvent2014_7_1_scaffold_42_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9029..9946)
DNA (918bp) protein (306aa)
rbn; RNase BN (EC:3.1.13.1)
Ribonuclease BN {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase BN {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01818};; Ribonuclease Z homolog {ECO:0000256|HAMAP-Rule:MF_0
Ribonuclease BN n=392 Tax=Enterobacteriaceae RepID=RBN_ECOBW rbh
NECEvent2014_7_1_scaffold_42_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10011..10472
DNA (462bp) protein (154aa)
Protein ElaA n=509 Tax=Enterobacteriaceae RepID=ELAA_ECOLI rbh
hypothetical protein
Acetyltransferase family protein {ECO:0000313|EMBL:KDZ41789.1}; TaxID=1444137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esch
NECEvent2014_7_1_scaffold_42_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10527..10832
DNA (306bp) protein (102aa)
Protein ElaB n=1340 Tax=Enterobacteriaceae RepID=ELAB_ECO57
hypothetical protein
Protein elaB {ECO:0000313|EMBL:EQN25875.1}; TaxID=1280961 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 6 (
NECEvent2014_7_1_scaffold_42_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10911..12206
DNA (1296bp) protein (432aa)
Isochorismate synthase {ECO:0000313|EMBL:EII48933.1}; EC=5.4.4.2 {ECO:0000313|EMBL:EII48933.1};; TaxID=869688 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriac
Menaquinone-specific isochorismate synthase n=145 Tax=Enterobacteriaceae RepID=MENF_ECOLI rbh
menF; isochorismate synthase 2
NECEvent2014_7_1_scaffold_42_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12295..13965
DNA (1671bp) protein (557aa)
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase {ECO:0000256|HAMAP-Rule:MF_01659, ECO:0000256|SAAS:SAAS00056887}; Short=SEPHCHC synthase {ECO:0000256|HAMAP-Rule:MF_01659};; EC=
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase n=183 Tax=Escherichia RepID=MEND_ECOBW rbh
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase
NECEvent2014_7_1_scaffold_42_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13962..14720
DNA (759bp) protein (253aa)
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase {ECO:0000256|HAMAP-Rule:MF_01660, ECO:0000256|SAAS:SAAS00195264}; Short=SHCHC synthase {ECO:0000256|HAMAP-Rule:MF_01660};; EC=4.2.99.20 {
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase n=117 Tax=Escherichia RepID=MENH_ECOBW rbh
yfbB; acyl-CoA thioester hydrolase YfbB
NECEvent2014_7_1_scaffold_42_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14735..15592
DNA (858bp) protein (286aa)
1,4-dihydroxy-2-naphthoyl-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934}; Short=DHNA-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934};; EC=4.1.3.36 {ECO:0000256|HAMAP-Rule:MF_01934};; TaxID=1446704 spec
1,4-Dihydroxy-2-naphthoyl-CoA synthase n=916 Tax=Enterobacteriaceae RepID=MENB_ECOL6 rbh
menB; naphthoate synthase
NECEvent2014_7_1_scaffold_42_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15592..16554
DNA (963bp) protein (321aa)
o-succinylbenzoate synthase {ECO:0000256|HAMAP-Rule:MF_00470, ECO:0000256|SAAS:SAAS00050627}; Short=OSB synthase {ECO:0000256|HAMAP-Rule:MF_00470};; Short=OSBS {ECO:0000256|HAMAP-Rule:MF_00470};; EC=4
o-succinylbenzoate synthase n=117 Tax=Enterobacteriaceae RepID=MENC_ECOBW rbh
menC; gamma/gm+: o-succinylbenzoic acid (OSB) synthetase MenC
NECEvent2014_7_1_scaffold_42_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16551..17906
DNA (1356bp) protein (452aa)
2-succinylbenzoate--CoA ligase {ECO:0000256|HAMAP-Rule:MF_00731}; EC=6.2.1.26 {ECO:0000256|HAMAP-Rule:MF_00731};; o-succinylbenzoyl-CoA synthetase {ECO:0000256|HAMAP-Rule:MF_00731}; TaxID=562 species=
O-succinylbenzoate-CoA ligase n=8 Tax=Escherichia coli RepID=B1IXS6_ECOLC rbh
O-succinylbenzoic acid--CoA ligase rbh
NECEvent2014_7_1_scaffold_42_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18016..18282
DNA (267bp) protein (89aa)
Signal transduction protein PmrD n=305 Tax=Enterobacteriaceae RepID=PMRD_ECOLI
polymyxin resistance protein B
Putative signal transduction protein PmrD {ECO:0000313|EMBL:EKJ83978.1}; TaxID=1169664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sou
NECEvent2014_7_1_scaffold_42_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18276..18662)
DNA (387bp) protein (129aa)
Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF n=28 Tax=Escherichia coli RepID=ARNF_ECOHS
hypothetical protein
Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF {ECO:0000256|HAMAP-Rule:MF_00538, ECO:0000256|SAAS:SAAS00016708}; Short=L-Ara4N-phosphoundecaprenol flippase subunit ArnF
NECEvent2014_7_1_scaffold_42_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18662..18997)
DNA (336bp) protein (112aa)
Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE n=703 Tax=Enterobacteriaceae RepID=ARNE_ECO24
small multidrug resistance protein
Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE {ECO:0000256|HAMAP-Rule:MF_01869, ECO:0000256|SAAS:SAAS00166808}; Short=L-Ara4N-phosphoundecaprenol flippase subunit ArnE
NECEvent2014_7_1_scaffold_42_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18994..20646)
DNA (1653bp) protein (551aa)
Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase {ECO:0000256|HAMAP-Rule:MF_01165}; EC=2.4.2.43 {ECO:0000256|HAMAP-Rule:MF_01165};; 4-amino-4-deoxy-L-arabinose lipid A t
Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase n=170 Tax=Escherichia RepID=ARNT_ECODH rbh
arnT; 4-amino-4-deoxy-L-arabinose transferase
NECEvent2014_7_1_scaffold_42_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20646..21536)
DNA (891bp) protein (297aa)
Probable 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD {ECO:0000256|HAMAP-Rule:MF_01870, ECO:0000256|SAAS:SAAS00011687}; EC=3.5.1.n3 {ECO:0000256|HAMAP-Rule:MF_01870, ECO:000025
Probable 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD n=397 Tax=Enterobacteriaceae RepID=ARND_ECODH rbh
polysaccharide deacetylase
NECEvent2014_7_1_scaffold_42_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21533..23515)
DNA (1983bp) protein (661aa)
Bifunctional polymyxin resistance protein ArnA n=151 Tax=Escherichia RepID=ARNA_ECOBW rbh
bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase
Bifunctional polymyxin resistance protein ArnA {ECO:0000256|HAMAP-Rule:MF_01166, ECO:0000256|SAAS:SAAS00018678}; TaxID=1182702 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales
NECEvent2014_7_1_scaffold_42_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23515..24483)
DNA (969bp) protein (323aa)
Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase {ECO:0000256|HAMAP-Rule:MF_01164, ECO:0000256|SAAS:SAAS00016541}; EC=2.4.2.53 {ECO:0000256|HAMAP-Rule:MF_01164, ECO:0000256|SAAS:SAAS
Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase n=411 Tax=Enterobacteriaceae RepID=ARNC_ECO55 rbh
arnC; undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase
NECEvent2014_7_1_scaffold_42_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24487..25644)
DNA (1158bp) protein (386aa)
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01167, ECO:0000256|SAAS:SAAS00016536}; EC=2.6.1.87 {ECO:0000256|HAMAP-Rule:MF_01167, ECO:0000256|SAAS:SAAS0001
arnB; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC:2.6.1.-)
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase n=1 Tax=Escherichia coli 909945-2 RepID=V0A7V9_ECOLX rbh
NECEvent2014_7_1_scaffold_42_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25934..26536
DNA (603bp) protein (201aa)
Lipopolysaccharide core heptose(II)-phosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01868}; EC=3.1.3.- {ECO:0000256|HAMAP-Rule:MF_01868};; TaxID=1269007 species="Bacteria; Proteobacteria; Gammaproteo
Lipopolysaccharide core heptose(II)-phosphate phosphatase n=152 Tax=Escherichia RepID=AIS_ECOBW rbh
ais; hypothetical protein
NECEvent2014_7_1_scaffold_42_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26575..27000)
DNA (426bp) protein (142aa)
Nucleoside triphosphatase NudI {ECO:0000256|HAMAP-Rule:MF_01846}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01846};; Pyrimidine deoxynucleoside triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01846
Nucleoside triphosphatase NudI n=177 Tax=Escherichia RepID=NUDI_ECOBW
yfaO; putative NUDIX hydrolase
NECEvent2014_7_1_scaffold_42_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27279..27821
DNA (543bp) protein (181aa)
Uncharacterized protein YfaZ n=182 Tax=Escherichia RepID=YFAZ_ECOLI rbh
YfaZ family protein rbh
Outer membrane porin {ECO:0000313|EMBL:EOW13296.1}; TaxID=1182702 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli
NECEvent2014_7_1_scaffold_42_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27921..29123
DNA (1203bp) protein (401aa)
CinA-like protein n=183 Tax=Escherichia RepID=CINAL_ECOBW rbh
competence damage-inducible protein A
CinA-like protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=1169664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia col
NECEvent2014_7_1_scaffold_42_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29343..30125
DNA (783bp) protein (261aa)
Uncharacterized HTH-type transcriptional regulator RhmR n=179 Tax=Escherichia RepID=RHMR_ECOLI rbh
yfaX; putative DNA-binding transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:KDY64891.1}; TaxID=1444155 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
Displaying items 1-30 of 47 in total

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